MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0664 · 46 genes shown · anchor vapC8 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB8 (requalified) — antitoxin VapB8 vapB8 vapC8 (family_assigned) — PIN domain-containing protein vapC8 Rv0666 (dark) — hypothetical protein Rv0666 atsD (requalified) — arylsulfatase AtsD atsD vapB7 (requalified) — antitoxin vapB7 vapC7 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC7 secG (family_assigned) — preprotein translocase subunit SecG secG vapB42 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB42 vapB26 (requalified) — type II toxin-antitoxin system antitoxin VapB26 vapB26 nuoK (family_assigned) — NADH-quinone oxidoreductase subunit NuoK nuoK nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC Rv1458c (family_assigned) — ABC transporter ATP-binding protein Rv1458c vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 vapB47 (requalified) — antitoxin VapB47 vapB47 Rv0712 (family_assigned) — formylglycine-generating enzyme family protein Rv0712 glgC (requalified) — glucose-1-phosphate adenylyltransferase glgC mazE2 (family_assigned) — ribbon-helix-helix protein%2C CopG family mazE2 mazF2 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF2 secE1 (requalified) — preprotein translocase SecE secE1 secY (family_assigned) — preprotein translocase subunit SecY secY yidC (requalified) — membrane protein insertase YidC yidC secA1 (family_assigned) — protein translocase subunit SecA secA1 secA2 (requalified) — accessory Sec system translocase SecA2 secA2 ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 hsdS (family_assigned) — restriction endonuclease subunit S hsdS Rv2762c (family_assigned) — winged helix-turn-helix domain-containing protein Rv2762c Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 vapC20 (requalified) — type II toxin-antitoxin system toxin 23S rRNA-spec vapC20 Rv0580c (requalified) — mycobacterial cell wall protein Rv0580c Rv0580c vapB10 (family_assigned) — CopG family transcriptional regulator vapB10 Rv0579 (family_assigned) — Mut7-C RNAse domain-containing protein Rv0579 mog (family_assigned) — MogA/MoaB family molybdenum cofactor biosynthesis mog nuoJ (family_assigned) — NADH-quinone oxidoreductase subunit J nuoJ nuoN (family_assigned) — NADH-quinone oxidoreductase subunit NuoN nuoN nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoH (family_assigned) — NADH-quinone oxidoreductase subunit NuoH nuoH nuoF (family_assigned) — NADH-quinone oxidoreductase subunit NuoF nuoF nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD nuoA (family_assigned) — NADH-quinone oxidoreductase subunit A nuoA nuoM (family_assigned) — NADH-quinone oxidoreductase subunit M nuoM

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.