MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0656c · 46 genes shown · anchor vapB6 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC6 (requalified) — ribonuclease VapC6 vapC6 vapB6 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB6 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 Rv0658c (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0658c vapB41 (requalified) — antitoxin VapB41 vapB41 vapB14 (requalified) — antitoxin vapB14 vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 vapC37 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC37 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 mazF3 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF3 vapB17 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB17 mazF8 (requalified) — toxin mazF8 vapC41 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC41 vapC27 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC27 vapC2 (family_assigned) — PIN domain nuclease vapC2 Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298 Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0303 (requalified) — protochlorophyllide reductase Rv0303 vapC15 (family_assigned) — PIN domain nuclease vapC15 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c Rv1375 (family_assigned) — YcaO-like family protein Rv1375 rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv2600 (family_assigned) — integral membrane protein Rv2600 speE (requalified) — spermidine synthase speE vapC17 (family_assigned) — PIN domain-containing protein vapC17 Rv0229c (family_assigned) — PIN domain nuclease Rv0229c vapC14 (requalified) — ribonuclease VapC14 vapC14 Rv1950c (dark) — hypothetical protein Rv1950c Rv1949c (dark) — Conserved hypothetical protein Rv1949c Rv1951c (dark) — hypothetical protein Rv1951c Rv1948c (family_assigned) — hypothetical protein Rv1948c vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapB12 (requalified) — antitoxin vapB12 Rv3098A (family_assigned) — PemK-like protein Rv3098A vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapB47 (requalified) — antitoxin VapB47 vapB47 mazE9 (requalified) — antitoxin MazE9 mazE9 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapB37 (requalified) — antitoxin vapB37 vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.