MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0653c · 42 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0653c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0653c Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv0452 (family_assigned) — TetR family transcriptional regulator Rv0452 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv0603 (family_assigned) — hypothetical protein Rv0603 Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv1556 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1556 cobB (requalified) — NAD-dependent protein deacylase cobB embR (requalified) — response regulator transcription factor EmbR embR Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c lysE (requalified) — L-lysine exporter lysE Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 Rv1930c (requalified) — glutamine amidotransferase Rv1930c sigI (requalified) — RNA polymerase sigma factor SigI sigI virS (family_assigned) — AraC family transcriptional regulator virS Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R mftB (requalified) — mycofactocin biosynthesis chaperone MftB mftB mftC (requalified) — mycofactocin radical SAM maturase mftC Rv0690c (family_assigned) — DUF2332 domain-containing protein Rv0690c iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA lpqO (family_assigned) — DUF1259 domain-containing protein lpqO Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv0894 (family_assigned) — hypothetical protein Rv0894

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.