MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0627 · 46 genes shown · anchor vapB5 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 Rv0625c (family_assigned) — TVP38/TMEM64 family protein Rv0625c vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 Rv1871c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1871c vapB46 (requalified) — antitoxin VapB46 vapB46 vapB47 (requalified) — antitoxin VapB47 vapB47 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 vapB11 (requalified) — antitoxin VapB11 vapB11 vapB14 (requalified) — antitoxin vapB14 vapB41 (requalified) — antitoxin VapB41 vapB41 vapC8 (family_assigned) — PIN domain-containing protein vapC8 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 Rv3479 (requalified) — transmembrane protein Rv3479 vapC14 (requalified) — ribonuclease VapC14 vapC14 Rv0597c (family_assigned) — ATP-binding protein Rv0597c vapC27 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC27 vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 Rv2633c (requalified) — non-heme di-iron catalase Rv2633c Rv3406 (requalified) — alpha-ketoglutarate-dependent sulfate ester dioxyg Rv3406 lldD2 (requalified) — quinone-dependent L-lactate dehydrogenase lldD2 fbpA (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpA Rv1870c (family_assigned) — hypothetical protein Rv1870c carD (requalified) — RNA polymerase-binding transcription factor CarD carD tuf (requalified) — elongation factor Tu tuf cspA (requalified) — cold shock protein CspA cspA vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 Rv3386 (requalified) — transposase Rv3386 vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 vapC2 (family_assigned) — PIN domain nuclease vapC2 Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298 Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0303 (requalified) — protochlorophyllide reductase Rv0303 vapC15 (family_assigned) — PIN domain nuclease vapC15 vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 cobB (requalified) — NAD-dependent protein deacylase cobB Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395 parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.