MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0602c · 40 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA Rv0601c (requalified) — two component sensor kinase HK2 Rv0601c Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c Rv0603 (family_assigned) — hypothetical protein Rv0603 trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS prrB (requalified) — two-component system sensor histidine kinase PrrB prrB cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr mprB (requalified) — two-component system sensor histidine kinase MprB mprB Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c tcrY (requalified) — two component sensor kinase TcrY tcrY Rv1359 (family_assigned) — transcriptional regulator Rv1359 phoR (requalified) — sensory box histidine kinase PhoR phoR mprA (requalified) — two-component system response regulator MprA mprA trcR (requalified) — two-component system response regulator TrcR trcR Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB prrA (requalified) — two-component system response regulator PrrA prrA mtrA (requalified) — two-component system response regulator MtrA mtrA regX3 (requalified) — two component sensory transduction protein RegX regX3 lpqO (family_assigned) — DUF1259 domain-containing protein lpqO virS (family_assigned) — AraC family transcriptional regulator virS cobB (requalified) — NAD-dependent protein deacylase cobB kdpE (requalified) — two-component system response regulator KdpE kdpE tcrX (requalified) — two-component system response regulator TcrX tcrX phoP (requalified) — two-component system response regulator PhoP phoP Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c pepD (requalified) — serine protease PepD pepD Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv1931c (family_assigned) — transcriptional regulator Rv1931c oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv0894 (family_assigned) — hypothetical protein Rv0894

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.