MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0599c · 46 genes shown · anchor vapC27 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB27 (requalified) — type II toxin-antitoxin system antitoxin VapB27 vapB27 vapC27 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC27 Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c Rv0597c (family_assigned) — ATP-binding protein Rv0597c Rv0601c (requalified) — two component sensor kinase HK2 Rv0601c vapC29 (requalified) — type II toxin-antitoxin system ribonuclease VapC29 vapC29 mazF9 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF9 vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 vapB40 (family_assigned) — AbrB/MazE/SpoVT family DNA-binding domain-containi vapB40 mazE9 (requalified) — antitoxin MazE9 mazE9 vapB19 (family_assigned) — CopG family transcriptional regulator vapB19 vapB39 (requalified) — antitoxin VapB39 vapB39 vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapC28 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC28 tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA prrA (requalified) — two-component system response regulator PrrA prrA mtrA (requalified) — two-component system response regulator MtrA mtrA regX3 (requalified) — two component sensory transduction protein RegX regX3 mprA (requalified) — two-component system response regulator MprA mprA trcR (requalified) — two-component system response regulator TrcR trcR Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 Rv3672c (requalified) — CoA pyrophosphatase Rv3672c Rv2609c (family_assigned) — NUDIX domain-containing protein Rv2609c rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD gadB (requalified) — glutamate decarboxylase gadB Rv0919 (family_assigned) — GNAT family N-acetyltransferase Rv0919 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB vapB29 (requalified) — antitoxin VapB29 vapB29 Rv0616c (dark) — Hypothetical protein Rv0616c galTa (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTa galTb (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTb Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 galK (requalified) — galactokinase galK mazE7 (requalified) — antitoxin MazE7 mazE7 Rv2802c (dark) — DUF2293 domain-containing protein Rv2802c mazE6 (requalified) — antitoxin MazE6 mazE6 Rv2803 (family_assigned) — hypothetical protein Rv2803 mazF5 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF5 vapB1 (requalified) — antitoxin VapB1 vapB1 Rv3098A (family_assigned) — PemK-like protein Rv3098A Rv0064 (family_assigned) — UPF0182 family protein Rv0064 vapB47 (requalified) — antitoxin VapB47 vapB47

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.