MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0596c · 46 genes shown · anchor vapC4 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapC8 (family_assigned) — PIN domain-containing protein vapC8 vapC14 (requalified) — ribonuclease VapC14 vapC14 Rv0597c (family_assigned) — ATP-binding protein Rv0597c vapC27 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC27 vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 Rv3180c (family_assigned) — type II toxin-antitoxin system VapC family toxin Rv3180c vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 vapC7 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC7 vapC13 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC13 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 Rv3479 (requalified) — transmembrane protein Rv3479 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 Rv0625c (family_assigned) — TVP38/TMEM64 family protein Rv0625c Rv1871c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1871c vapB8 (requalified) — antitoxin VapB8 vapB8 Rv0666 (dark) — hypothetical protein Rv0666 atsD (requalified) — arylsulfatase AtsD atsD vapB47 (requalified) — antitoxin VapB47 vapB47 vapB14 (requalified) — antitoxin vapB14 Rv1949c (dark) — Conserved hypothetical protein Rv1949c Rv1950c (dark) — hypothetical protein Rv1950c Rv1951c (dark) — hypothetical protein Rv1951c Rv0919 (family_assigned) — GNAT family N-acetyltransferase Rv0919 vapB27 (requalified) — type II toxin-antitoxin system antitoxin VapB27 vapB27 Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c vapC28 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC28 vapB3 (family_assigned) — type II toxin-antitoxin system CcdA family antitox vapB3 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 Rv3098A (family_assigned) — PemK-like protein Rv3098A vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapB34 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB34 parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395 ethR (family_assigned) — HTH-type transcriptional regulator EthR ethR sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 vapB46 (requalified) — antitoxin VapB46 vapB46

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.