MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0584 · 42 genes shown · anchor lpqN · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0584 (family_assigned) — GH92 family glycosyl hydrolase Rv0584 lpqN (family_assigned) — LpqN/LpqT family lipoprotein lpqN Rv1733c (family_assigned) — hypothetical protein Rv1733c rsmA (requalified) — anti-sigma-M factor RsmA rsmA cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv3551 (family_assigned) — CoA transferase subunit A Rv3551 kdpB (family_assigned) — potassium-transporting ATPase subunit KdpB kdpB lprA (requalified) — TLR2 agonist LprA lprA lpqL (family_assigned) — M28 family metallopeptidase lpqL htpG (requalified) — molecular chaperone HtpG htpG lpqH (requalified) — lipoprotein LpqH lpqH lprF (requalified) — lipoprotein LprF lprF Rv3134c (requalified) — universal stress protein Rv3134c acg (family_assigned) — FMN-binding protein Acg acg Rv2627c (family_assigned) — alpha/beta hydrolase Rv2627c hrp1 (requalified) — hypoxic response protein Hrp1 hrp1 Rv2030c (family_assigned) — erythromycin esterase family protein Rv2030c narK2 (requalified) — nitrate transporter NarK narK2 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM Rv3909 (dark) — hypothetical protein Rv3909 murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ mutT4 (requalified) — NUDIX hydrolase mutT4 trxC (requalified) — thioredoxin trxC trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 ift (requalified) — necrotizing toxin immunity factor IFT ift esxE (requalified) — ESAT-6 like protein EsxE esxE eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 esxF (requalified) — pore-forming CpnT exporter EsxF esxF Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv3552 (family_assigned) — CoA-transferase subunit beta Rv3552 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 Rv3553 (requalified) — nitronate monooxygenase Rv3553 Rv3549c (family_assigned) — SDR family oxidoreductase Rv3549c Rv3548c (family_assigned) — SDR family oxidoreductase Rv3548c fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 kdpA (family_assigned) — potassium-transporting ATPase subunit KdpA kdpA kdpC (family_assigned) — K(+)-transporting ATPase subunit C kdpC kdpD (requalified) — sensor histidine kinase KdpD kdpD kdpE (requalified) — two-component system response regulator KdpE kdpE kdpF (requalified) — membrane protein KdpF kdpF Rv2181 (requalified) — alpha-(1-2)-phosphatidylinositol mannoside mannosy Rv2181

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.