MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0561c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
menJ (requalified) — menaquinone reductase menJ fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA Rv0560c (requalified) — benzoquinone methyltransferase Rv0560c grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 htpX (requalified) — zinc metalloprotease HtpX htpX Rv0559c (family_assigned) — DUF732 domain-containing protein Rv0559c fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB cobN (family_assigned) — cobaltochelatase subunit CobN cobN ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA Rv2850c (family_assigned) — magnesium chelatase subunit D family protein Rv2850c grcC2 (requalified) — polyprenyl-diphosphate synthase GrcC grcC2 Rv0958 (family_assigned) — ATP-binding protein Rv0958 phyA (requalified) — presqualene diphosphate synthase HpnD phyA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 fadE25 (requalified) — acyl-CoA dehydrogenase fadE25 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 Rv3160c (family_assigned) — helix-turn-helix domain-containing protein Rv3160c eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 idsB (family_assigned) — polyprenyl synthetase family protein idsB idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 35kd_ag (family_assigned) — hypothetical protein 35kd_ag Rv3837c (family_assigned) — histidine phosphatase family protein Rv3837c pepD (requalified) — serine protease PepD pepD Rv2694c (family_assigned) — OB-fold nucleic acid binding domain-containing pro Rv2694c moaB2 (family_assigned) — MogA/MoaB family molybdenum cofactor biosynthesis moaB2 Rv0455c (family_assigned) — DUF5078 domain-containing protein Rv0455c Rv2536 (family_assigned) — B-4DMT family transporter Rv2536 secE2 (family_assigned) — protein translocase subunit SecE secE2 fadE20 (family_assigned) — acyl-CoA dehydrogenase family protein fadE20 cobO (requalified) — cob(I)alamin adenosyltransferase cobO cobB (requalified) — cobyrinate a%2Cc-diamide synthase cobB cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ cobL (requalified) — bifunctional cobalt-precorrin-7 (C(5))-methyltrans cobL Rv1314c (requalified) — cob(I)yrinic acid a%2Cc-diamide adenosyltransferas Rv1314c Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 dprE1 (requalified) — decaprenylphospho-beta-D-ribofuranose 2-dehydrogen dprE1 glf (requalified) — UDP-galactopyranose mutase glf lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt hemY (requalified) — protoporphyrinogen oxidase hemY hemZ (requalified) — ferrochelatase hemZ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.