MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0558 · 42 genes shown · anchor mgtA · open gene page → · ← back to 1 hop

Evidence: Min score 0
menH (requalified) — demethylmenaquinone methyltransferase menH menA (requalified) — 1%2C4-dihydroxy-2-naphthoate polyprenyltransferase menA mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 menC (requalified) — o-succinylbenzoate synthase menC bpoC (family_assigned) — alpha/beta hydrolase bpoC grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 Rv0552 (requalified) — amidohydrolase Rv0552 grcC2 (requalified) — polyprenyl-diphosphate synthase GrcC grcC2 cydB (family_assigned) — cytochrome d ubiquinol oxidase subunit II cydB cydA (family_assigned) — cytochrome D ubiquinol oxidase subunit I CydA cydA Rv1523 (requalified) — class I SAM-dependent methyltransferase Rv1523 Rv1847 (family_assigned) — PaaI family thioesterase Rv1847 menB (requalified) — 1,4-dihydroxy-2-naphthoyl-CoA synthase menB Rv0535 (requalified) — 5'-methylthioadenosine phosphorylase Rv0535 galE3 (requalified) — UDP-glucose 4-epimerase GalE galE3 glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ entC (requalified) — isochorismate synthase entC Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c menE (requalified) — o-succinylbenzoate--CoA ligase menE fadD8 (requalified) — fatty-acid--CoA ligase FadD8 fadD8 hpx (requalified) — non-heme haloperoxidase Hpx hpx idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 idsB (family_assigned) — polyprenyl synthetase family protein idsB idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 phyA (requalified) — presqualene diphosphate synthase HpnD phyA menJ (requalified) — menaquinone reductase menJ Rv1086 (family_assigned) — undecaprenyl diphosphate synthase family protein Rv1086 cydD (family_assigned) — cytochrome biosyntheisis ABC transporter ATP-bindi cydD cydC (family_assigned) — thiol reductant ABC exporter subunit CydC cydC Rv1624c (family_assigned) — HdeD family acid-resistance protein Rv1624c cya (requalified) — adenylate cyclase cya panD (requalified) — aspartate 1-decarboxylase panD Rv1524 (requalified) — glycosyltransferase Rv1524 wbbL2 (family_assigned) — glycosyltransferase family 2 protein wbbL2 mmpL12 (requalified) — RND transporter MmpL12 mmpL12 Rv2067c (requalified) — class I SAM-dependent methyltransferase Rv2067c Rv3322c (requalified) — methyltransferase Rv3322c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.