MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0556 · 41 genes shown · anchor menD · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD bpoC (family_assigned) — alpha/beta hydrolase bpoC mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv2732c (family_assigned) — hypothetical protein Rv2732c Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv3205c (family_assigned) — hypothetical protein Rv3205c Rv0996 (family_assigned) — hypothetical protein Rv0996 entC (requalified) — isochorismate synthase entC menC (requalified) — o-succinylbenzoate synthase menC menB (requalified) — 1,4-dihydroxy-2-naphthoyl-CoA synthase menB Rv0552 (requalified) — amidohydrolase Rv0552 hpx (requalified) — non-heme haloperoxidase Hpx hpx menH (requalified) — demethylmenaquinone methyltransferase menH glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ folC (requalified) — bifunctional tetrahydrofolate synthase/dihydrofola folC valS (requalified) — valine--tRNA ligase valS Rv0863 (family_assigned) — hypothetical protein Rv0863 rhlE (requalified) — DEAD/DEAH box helicase rhlE lppL (family_assigned) — hypothetical protein lppL lpqW (requalified) — lipoarabinomannan biosynthesis protein LpqW lpqW Rv3437 (dark) — DUF2510 domain-containing protein Rv3437 Rv3851 (dark) — hypothetical protein Rv3851 espR (family_assigned) — type VII secretion system ESX-1 transcriptional re espR miaB (requalified) — tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiot miaB xseA (family_assigned) — exodeoxyribonuclease VII large subunit xseA xseB (family_assigned) — exodeoxyribonuclease VII small subunit xseB Rv1106c (requalified) — 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-is Rv1106c lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c moeB1 (requalified) — adenylyltransferase/sulfurtransferase MoeZ moeB1 Rv0358 (requalified) — peptidase M50 Rv0358 moeA1 (requalified) — molybdopterin molybdenumtransferase 1 moeA1 hbhA (requalified) — heparin-binding hemagglutinin HbhA hbhA ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.