MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0552 · 46 genes shown · anchor menC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0552 (requalified) — amidohydrolase Rv0552 menC (requalified) — o-succinylbenzoate synthase menC bpoC (family_assigned) — alpha/beta hydrolase bpoC fadD8 (requalified) — fatty-acid--CoA ligase FadD8 fadD8 mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 menB (requalified) — 1,4-dihydroxy-2-naphthoyl-CoA synthase menB Rv0074 (family_assigned) — amidohydrolase family protein Rv0074 menH (requalified) — demethylmenaquinone methyltransferase menH Rv0547c (family_assigned) — SDR family oxidoreductase Rv0547c Rv2672 (requalified) — alpha/beta fold hydrolase Rv2672 Rv3829c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3829c menE (requalified) — o-succinylbenzoate--CoA ligase menE hpx (requalified) — non-heme haloperoxidase Hpx hpx rplF (requalified) — 50S ribosomal protein L6 rplF pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks12 (requalified) — type I polyketide synthase pks12 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ entC (requalified) — isochorismate synthase entC Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c Rv1847 (family_assigned) — PaaI family thioesterase Rv1847 menA (requalified) — 1%2C4-dihydroxy-2-naphthoate polyprenyltransferase menA Rv0544c (family_assigned) — hypothetical protein Rv0544c Rv0075 (family_assigned) — MalY/PatB family protein Rv0075 Rv0073 (family_assigned) — ATP-binding cassette domain-containing protein Rv0073 Rv0072 (family_assigned) — FtsX-like permease family protein Rv0072 Rv2052c (requalified) — amidohydrolase Rv2052c Rv1922 (requalified) — serine hydrolase Rv1922 pitA (requalified) — anion permease pitA Rv3485c (requalified) — short-chain type dehydrogenase/reductase Rv3485c Rv3740c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3740c tgs2 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr tgs2 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC lprC (family_assigned) — DUF3558 domain-containing protein lprC Rv3035 (family_assigned) — hypothetical protein Rv3035 lmeA (requalified) — mannan chain length control protein LmeA lmeA msrB (requalified) — peptide-methionine (R)-S-oxide reductase MsrB msrB lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv3828c (requalified) — resolvase Rv3828c Rv3827c (requalified) — transposase Rv3827c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.