MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0550c · 42 genes shown · anchor vapC3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB3 (family_assigned) — type II toxin-antitoxin system CcdA family antitox vapB3 vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3 fadD8 (requalified) — fatty-acid--CoA ligase FadD8 fadD8 menB (requalified) — 1,4-dihydroxy-2-naphthoyl-CoA synthase menB Rv0918 (family_assigned) — DUF1778 domain-containing protein Rv0918 Rv3188 (family_assigned) — antitoxin Xre/MbcA/ParS toxin-binding domain-conta Rv3188 Rv3189 (family_assigned) — RES family NAD+ phosphorylase Rv3189 vapB26 (requalified) — type II toxin-antitoxin system antitoxin VapB26 vapB26 Rv2656c (dark) — DUF2742 domain-containing protein Rv2656c vapB10 (family_assigned) — CopG family transcriptional regulator vapB10 rpsH (requalified) — 30S ribosomal protein S8 rpsH vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 Rv3098A (family_assigned) — PemK-like protein Rv3098A vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 vapB47 (requalified) — antitoxin VapB47 vapB47 vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 menC (requalified) — o-succinylbenzoate synthase menC Rv0552 (requalified) — amidohydrolase Rv0552 rplF (requalified) — 50S ribosomal protein L6 rplF pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks12 (requalified) — type I polyketide synthase pks12 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 menE (requalified) — o-succinylbenzoate--CoA ligase menE Rv1847 (family_assigned) — PaaI family thioesterase Rv1847 menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD menA (requalified) — 1%2C4-dihydroxy-2-naphthoate polyprenyltransferase menA Rv0544c (family_assigned) — hypothetical protein Rv0544c Rv0919 (family_assigned) — GNAT family N-acetyltransferase Rv0919 vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 Rv2775 (requalified) — GCN5-like N-acetyltransferase Rv2775 wbbL2 (family_assigned) — glycosyltransferase family 2 protein wbbL2 Rv0133 (family_assigned) — GNAT family N-acetyltransferase Rv0133 Rv2170 (requalified) — N-acetyltransferase Rv2170 Rv1989c (family_assigned) — RES family NAD+ phosphorylase Rv1989c Rv2035 (family_assigned) — SRPBCC family protein Rv2035 Rv2022c (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv2022c Rv0837c (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv0837c vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 vapC20 (requalified) — type II toxin-antitoxin system toxin 23S rRNA-spec vapC20 Rv0580c (requalified) — mycobacterial cell wall protein Rv0580c Rv0580c Rv0579 (family_assigned) — Mut7-C RNAse domain-containing protein Rv0579 mog (family_assigned) — MogA/MoaB family molybdenum cofactor biosynthesis mog

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.