MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0546c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0546c (family_assigned) — VOC family protein Rv0546c Rv0547c (family_assigned) — SDR family oxidoreductase Rv0547c pitA (requalified) — anion permease pitA Rv0544c (family_assigned) — hypothetical protein Rv0544c Rv1473A (family_assigned) — transcriptional regulator Rv1473A menB (requalified) — 1,4-dihydroxy-2-naphthoyl-CoA synthase menB Rv0543c (family_assigned) — DUF3349 domain-containing protein Rv0543c Rv0863 (family_assigned) — hypothetical protein Rv0863 pimE (requalified) — mannosyltransferase pimE glnQ (family_assigned) — ATP-binding cassette domain-containing protein glnQ greA (requalified) — transcription elongation factor GreA greA caeA (requalified) — carboxylesterase CaeA caeA fadE25 (requalified) — acyl-CoA dehydrogenase fadE25 Rv3485c (requalified) — short-chain type dehydrogenase/reductase Rv3485c Rv3740c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3740c tgs2 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr tgs2 menE (requalified) — o-succinylbenzoate--CoA ligase menE Rv0541c (family_assigned) — integral membrane protein Rv0541c trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC Rv1473 (family_assigned) — macrolide ABC transporter ATP-binding protein Rv1473 echA12 (requalified) — enoyl-CoA hydratase echA12 Rv2314c (family_assigned) — TldD/PmbA family protein Rv2314c rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv2709 (dark) — DUF3099 domain-containing protein Rv2709 Rv2844 (family_assigned) — ferritin-like domain-containing protein Rv2844 Rv1847 (family_assigned) — PaaI family thioesterase Rv1847 menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD menC (requalified) — o-succinylbenzoate synthase menC menA (requalified) — 1%2C4-dihydroxy-2-naphthoate polyprenyltransferase menA Rv0184 (dark) — DUF2786 domain-containing protein Rv0184 Rv2876 (requalified) — transmembrane protein Rv2876 ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c ctaE (family_assigned) — heme-copper oxidase subunit III ctaE qcrA (requalified) — hypothetical protein qcrA Rv1158c (dark) — hypothetical protein Rv1158c Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051 Rv1157c (dark) — hypothetical protein Rv1157c aftD (family_assigned) — DUF3367 domain-containing protein aftD Rv2563 (family_assigned) — ABC transporter permease Rv2563 Rv0072 (family_assigned) — FtsX-like permease family protein Rv0072 Rv2562 (family_assigned) — Conserved hypothetical protein Rv2562 Rv0393 (family_assigned) — hypothetical protein Rv0393

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.