MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0545c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
pitA (requalified) — anion permease pitA Rv0544c (family_assigned) — hypothetical protein Rv0544c Rv0543c (family_assigned) — DUF3349 domain-containing protein Rv0543c menE (requalified) — o-succinylbenzoate--CoA ligase menE Rv0541c (family_assigned) — integral membrane protein Rv0541c Rv0547c (family_assigned) — SDR family oxidoreductase Rv0547c Rv0546c (family_assigned) — VOC family protein Rv0546c cysG (requalified) — uroporphyrinogen-III C-methyltransferase cysG pyrH (requalified) — UMP kinase pyrH lysX (requalified) — bifunctional lysine--tRNA ligase/phosphatidylglyce lysX menB (requalified) — 1,4-dihydroxy-2-naphthoyl-CoA synthase menB Rv1841c (family_assigned) — hemolysin family protein Rv1841c lysS (requalified) — lysine--tRNA ligase lysS trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC Rv0184 (dark) — DUF2786 domain-containing protein Rv0184 menC (requalified) — o-succinylbenzoate synthase menC engA (requalified) — ribosome biogenesis GTPase Der engA Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 galE3 (requalified) — UDP-glucose 4-epimerase GalE galE3 Rv0218 (requalified) — molybdopterin-dependent oxidoreductase Rv0218 Rv3485c (requalified) — short-chain type dehydrogenase/reductase Rv3485c Rv3740c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3740c tgs2 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr tgs2 Rv1473A (family_assigned) — transcriptional regulator Rv1473A hemD (requalified) — uroporphyrin-III C-methyltransferase hemD hemC (requalified) — hydroxymethylbilane synthase hemC Rv0260c (requalified) — uroporphyrinogen-III synthase Rv0260c cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ Rv0259c (family_assigned) — sirohydrochlorin chelatase Rv0259c cysC (requalified) — adenylyl-sulfate kinase cysC frr (requalified) — ribosome recycling factor frr upp (requalified) — uracil phosphoribosyltransferase upp atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH ndkA (requalified) — nucleoside-diphosphate kinase ndkA pyrR (family_assigned) — bifunctional pyr operon transcriptional regulator/ pyrR tsf (requalified) — translation elongation factor Ts tsf gltS (requalified) — glutamate--tRNA ligase gltS ileS (requalified) — isoleucine--tRNA ligase ileS metS (requalified) — methionine--tRNA ligase metS guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA argS (requalified) — arginine--tRNA ligase argS Rv1847 (family_assigned) — PaaI family thioesterase Rv1847 menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD menA (requalified) — 1%2C4-dihydroxy-2-naphthoate polyprenyltransferase menA Rv1842c (family_assigned) — hemolysin family protein Rv1842c guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.