MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0542c · 46 genes shown · anchor menB · open gene page → · ← back to 1 hop

Evidence: Min score 0
menE (requalified) — o-succinylbenzoate--CoA ligase menE menB (requalified) — 1,4-dihydroxy-2-naphthoyl-CoA synthase menB menC (requalified) — o-succinylbenzoate synthase menC Rv0541c (family_assigned) — integral membrane protein Rv0541c Rv0543c (family_assigned) — DUF3349 domain-containing protein Rv0543c pitA (requalified) — anion permease pitA engA (requalified) — ribosome biogenesis GTPase Der engA fadD17 (requalified) — long-chain-fatty-acid--CoA ligase FadD17 fadD17 Rv0544c (family_assigned) — hypothetical protein Rv0544c rplF (requalified) — 50S ribosomal protein L6 rplF mbtE (requalified) — peptide synthetase mbtE pks12 (requalified) — type I polyketide synthase pks12 mas (requalified) — mycocerosate synthase mas Rv1847 (family_assigned) — PaaI family thioesterase Rv1847 menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD menA (requalified) — 1%2C4-dihydroxy-2-naphthoate polyprenyltransferase menA Rv0552 (requalified) — amidohydrolase Rv0552 bpoC (family_assigned) — alpha/beta hydrolase bpoC fadD8 (requalified) — fatty-acid--CoA ligase FadD8 fadD8 Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 galE3 (requalified) — UDP-glucose 4-epimerase GalE galE3 Rv0218 (requalified) — molybdopterin-dependent oxidoreductase Rv0218 Rv0547c (family_assigned) — SDR family oxidoreductase Rv0547c Rv0184 (dark) — DUF2786 domain-containing protein Rv0184 Rv0546c (family_assigned) — VOC family protein Rv0546c cmk (requalified) — (d)CMP kinase cmk Rv1711 (requalified) — pseudouridine synthase Rv1711 scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB scpA (requalified) — segregation/condensation protein A scpA Rv1708 (requalified) — initiation inhibitor protein Rv1708 dnaG (requalified) — DNA primase dnaG fadE26 (requalified) — acyl-CoA dehydrogenase fadE26 fadE27 (family_assigned) — acyl-CoA dehydrogenase family protein fadE27 fadD18 (requalified) — fatty-acid--CoA ligase FadD18 fadD18 Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c fadD22 (requalified) — p-hydroxybenzoic acid--AMP ligase FadD22 fadD22 trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsG (requalified) — 30S ribosomal protein S7 rpsG rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplB (requalified) — 50S ribosomal protein L2 rplB mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH mbtB (requalified) — phenyloxazoline synthase MbtB mbtB mbtC (requalified) — polyketide synthetase MbtC mbtC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.