MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0541c · 42 genes shown · anchor menE · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0541c (family_assigned) — integral membrane protein Rv0541c menE (requalified) — o-succinylbenzoate--CoA ligase menE Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 galE3 (requalified) — UDP-glucose 4-epimerase GalE galE3 engA (requalified) — ribosome biogenesis GTPase Der engA Rv0218 (requalified) — molybdopterin-dependent oxidoreductase Rv0218 Rv0543c (family_assigned) — DUF3349 domain-containing protein Rv0543c Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 Rv0219 (dark) — hypothetical protein Rv0219 Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 pitA (requalified) — anion permease pitA Rv0544c (family_assigned) — hypothetical protein Rv0544c Rv0547c (family_assigned) — SDR family oxidoreductase Rv0547c menB (requalified) — 1,4-dihydroxy-2-naphthoyl-CoA synthase menB menC (requalified) — o-succinylbenzoate synthase menC ptrp (family_assigned) — hypothetical protein ptrp rmlD (requalified) — dTDP-4-dehydrorhamnose reductase rmlD Rv0535 (requalified) — 5'-methylthioadenosine phosphorylase Rv0535 rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC Rv3784 (requalified) — dTDP-glucose 4,6-dehydratase Rv3784 rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB cmk (requalified) — (d)CMP kinase cmk Rv1711 (requalified) — pseudouridine synthase Rv1711 scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB scpA (requalified) — segregation/condensation protein A scpA Rv1708 (requalified) — initiation inhibitor protein Rv1708 dnaG (requalified) — DNA primase dnaG lipC (requalified) — esterase LipC lipC Rv0184 (dark) — DUF2786 domain-containing protein Rv0184 echA1 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA1 Rv1126c (family_assigned) — MarR family transcriptional regulator Rv1126c fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 Rv1716 (family_assigned) — hypothetical protein Rv1716 Rv1717 (family_assigned) — cupin domain-containing protein Rv1717 Rv1718 (requalified) — 3-keto-5-aminohexanoate cleavage protein Rv1718 Rv3728 (requalified) — MFS transporter Rv3728 Rv1719 (family_assigned) — IclR family transcriptional regulator Rv1719 Rv0546c (family_assigned) — VOC family protein Rv0546c trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC Rv3485c (requalified) — short-chain type dehydrogenase/reductase Rv3485c Rv3740c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3740c tgs2 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr tgs2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.