MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0539 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 Rv0218 (requalified) — molybdopterin-dependent oxidoreductase Rv0218 galE3 (requalified) — UDP-glucose 4-epimerase GalE galE3 ptrp (family_assigned) — hypothetical protein ptrp Rv0541c (family_assigned) — integral membrane protein Rv0541c Rv0535 (requalified) — 5'-methylthioadenosine phosphorylase Rv0535 Rv0219 (dark) — hypothetical protein Rv0219 Rv3631 (family_assigned) — glycosyltransferase family 2 protein Rv3631 mtn (requalified) — 5'-methylthioadenosine/adenosylhomocysteine nucleo mtn mtr (requalified) — mycothione reductase mtr lipC (requalified) — esterase LipC lipC rmlD (requalified) — dTDP-4-dehydrorhamnose reductase rmlD rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC Rv3784 (requalified) — dTDP-glucose 4,6-dehydratase Rv3784 rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv1775 (family_assigned) — hypothetical protein Rv1775 Rv3909 (dark) — hypothetical protein Rv3909 menE (requalified) — o-succinylbenzoate--CoA ligase menE engA (requalified) — ribosome biogenesis GTPase Der engA Rv0543c (family_assigned) — DUF3349 domain-containing protein Rv0543c speE (requalified) — spermidine synthase speE apt (requalified) — adenine phosphoribosyltransferase apt menA (requalified) — 1%2C4-dihydroxy-2-naphthoate polyprenyltransferase menA fabH (requalified) — beta-ketoacyl-ACP synthase III fabH echA1 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA1 Rv1126c (family_assigned) — MarR family transcriptional regulator Rv1126c Rv3632 (family_assigned) — DUF2304 domain-containing protein Rv3632 Rv3630 (family_assigned) — hypothetical protein Rv3630 Rv3629c (family_assigned) — DUF475 domain-containing protein Rv3629c Rv1510 (family_assigned) — hypothetical protein Rv1510 Rv3779 (family_assigned) — DUF6541 family protein Rv3779 galE1 (requalified) — UDP-glucose 4-epimerase galE1 sahH (requalified) — adenosylhomocysteinase sahH ctpA (requalified) — heavy metal translocating P-type ATPase ctpA gltB (family_assigned) — glutamate synthase large subunit gltB Rv2148c (family_assigned) — YggS family pyridoxal phosphate-dependent enzyme Rv2148c Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT Rv2854 (family_assigned) — alpha/beta hydrolase Rv2854 Rv1734c (family_assigned) — hypothetical protein Rv1734c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.