MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0530 · 34 genes shown · anchor ccsA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0530 (family_assigned) — MinD/ParA family protein Rv0530 ccsA (requalified) — c-type cytochrome biogenesis protein CcsB ccsA Rv0528 (requalified) — cytochrome c biogenesis protein ResB Rv0528 Rv0526 (requalified) — thioredoxin Rv0526 ccdA (requalified) — cytochrome C-type biogenesis protein CcdA ccdA Rv0525 (family_assigned) — histidine phosphatase family protein Rv0525 hemL (requalified) — glutamate-1-semialdehyde 2%2C1-aminomutase hemL Rv0531 (family_assigned) — DUF4229 domain-containing protein Rv0531 sigF (requalified) — RNA polymerase sigma factor SigF sigF sepH (requalified) — septation protein SepH sepH hemD (requalified) — uroporphyrin-III C-methyltransferase hemD ahpC (requalified) — peroxiredoxin AhpC ahpC Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c hemB (requalified) — porphobilinogen synthase hemB hemA (requalified) — glutamyl-tRNA reductase hemA hemC (requalified) — hydroxymethylbilane synthase hemC Rv3668c (requalified) — protease Rv3668c lprC (family_assigned) — DUF3558 domain-containing protein lprC lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv3346c (dark) — DUF3017 domain-containing protein Rv3346c aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv2525c (family_assigned) — DUF1906 domain-containing protein Rv2525c rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC usfY (family_assigned) — hypothetical protein usfY rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA serC (requalified) — phosphoserine transaminase serC Rv0885 (requalified) — diiron oxygenase Rv0885 fprB (requalified) — FAD-dependent oxidoreductase fprB Rv1002c (requalified) — dolichyl-phosphate-mannose--protein mannosyltransf Rv1002c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.