MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0525 · 39 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0525 (family_assigned) — histidine phosphatase family protein Rv0525 Rv0526 (requalified) — thioredoxin Rv0526 hemL (requalified) — glutamate-1-semialdehyde 2%2C1-aminomutase hemL ccdA (requalified) — cytochrome C-type biogenesis protein CcdA ccdA Rv0528 (requalified) — cytochrome c biogenesis protein ResB Rv0528 ccsA (requalified) — c-type cytochrome biogenesis protein CcsB ccsA Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 Rv0807 (family_assigned) — sterol carrier family protein Rv0807 Rv2256c (dark) — hypothetical protein Rv2256c ahpC (requalified) — peroxiredoxin AhpC ahpC hemB (requalified) — porphobilinogen synthase hemB hemA (requalified) — glutamyl-tRNA reductase hemA hemC (requalified) — hydroxymethylbilane synthase hemC hemD (requalified) — uroporphyrin-III C-methyltransferase hemD whiA (family_assigned) — DNA-binding protein WhiA whiA Rv2239c (family_assigned) — hypothetical protein Rv2239c cei (requalified) — envelope integrity protein Cei cei rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ sigA (requalified) — RNA polymerase sigma factor sigA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB secG (family_assigned) — preprotein translocase subunit SecG secG Rv2901c (dark) — DUF2469 domain-containing protein Rv2901c Rv1321 (requalified) — endonuclease NucS Rv1321 clpS (requalified) — ATP-dependent Clp protease adapter ClpS clpS Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv2708c (family_assigned) — hypothetical protein Rv2708c Rv2206 (family_assigned) — DUF3043 domain-containing protein Rv2206 purF (requalified) — amidophosphoribosyltransferase purF Rv2146c (family_assigned) — YggT family protein Rv2146c Rv2257c (family_assigned) — serine hydrolase domain-containing protein Rv2257c Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 Rv2033c (family_assigned) — DUF3097 domain-containing protein Rv2033c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.