MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0523c · 46 genes shown · anchor hemL · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0523c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv0523c hemL (requalified) — glutamate-1-semialdehyde 2%2C1-aminomutase hemL Rv0525 (family_assigned) — histidine phosphatase family protein Rv0525 Rv0756c (family_assigned) — hypothetical protein Rv0756c Rv2560 (family_assigned) — DUF2189 domain-containing protein Rv2560 ccdA (requalified) — cytochrome C-type biogenesis protein CcdA ccdA Rv0526 (requalified) — thioredoxin Rv0526 Rv2923c (family_assigned) — OsmC family protein Rv2923c mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 mmpL1 (requalified) — RND transporter MmpL1 mmpL1 Rv0466 (requalified) — acyl-[acyl-carrier-protein] thioesterase Rv0466 mmpL9 (requalified) — RND transporter MmpL9 mmpL9 mmpL2 (requalified) — RND transporter MmpL2 mmpL2 hemB (requalified) — porphobilinogen synthase hemB hemA (requalified) — glutamyl-tRNA reductase hemA hemC (requalified) — hydroxymethylbilane synthase hemC Rv0528 (requalified) — cytochrome c biogenesis protein ResB Rv0528 ccsA (requalified) — c-type cytochrome biogenesis protein CcsB ccsA Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c phoP (requalified) — two-component system response regulator PhoP phoP phoR (requalified) — sensory box histidine kinase PhoR phoR Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv3906c (requalified) — pullulanase Rv3906c ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA Rv2559c (requalified) — replication-associated recombination protein A Rv2559c papA2 (requalified) — trehalose-2-sulfate acyltransferase papA2 papA3 (requalified) — acyltransferase PapA3 papA3 papA1 (requalified) — acyltransferase PapA1 papA1 Rv2566 (family_assigned) — hypothetical protein Rv2566 Rv2567 (requalified) — circularly permuted type 2 ATP-grasp protein Rv2567 hemD (requalified) — uroporphyrin-III C-methyltransferase hemD ahpC (requalified) — peroxiredoxin AhpC ahpC acyP (requalified) — acylphosphatase acyP smc (requalified) — chromosome segregation protein SMC smc ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY fpg (requalified) — DNA-formamidopyrimidine glycosylase fpg sepIVA (requalified) — cell division protein SepIVA sepIVA rnc (requalified) — ribonuclease III rnc mmpS5 (requalified) — siderophore transporter accessory protein MmpS5 mmpS5 mmpR5 (family_assigned) — siderophore transport transcriptional regulator Mm mmpR5 Rv3160c (family_assigned) — helix-turn-helix domain-containing protein Rv3160c Rv1598c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1598c eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 mmpS1 (family_assigned) — MmpS family protein mmpS1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.