MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0516c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
oprA (requalified) — osmosensory protein OprA oprA Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv0263c (family_assigned) — 5-oxoprolinase/urea amidolyase family protein Rv0263c Rv0264c (family_assigned) — allophanate hydrolase subunit 1 Rv0264c Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC mkl (family_assigned) — ABC transporter ATP-binding protein mkl sigF (requalified) — RNA polymerase sigma factor SigF sigF Rv0517 (requalified) — acyltransferase Rv0517 bfrA (requalified) — bacterioferritin BfrA bfrA Rv1234 (requalified) — general stress protein Rv1234 yrbE1A (family_assigned) — ABC transporter permease yrbE1A rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 usfY (family_assigned) — hypothetical protein usfY aac (requalified) — aminoglycoside 2'-N-acetyltransferase aac accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 accA3 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA3 Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c accA2 (family_assigned) — biotin carboxylase N-terminal domain-containing pr accA2 Rv1249c (family_assigned) — hypothetical protein Rv1249c Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c moeY (family_assigned) — Rv1355c family protein moeY Rv1353c (family_assigned) — TetR/AcrR family transcriptional regulator C-termi Rv1353c Rv1356c (requalified) — hypothetical protein Rv1356c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv1357c (requalified) — cyclic diguanylate phosphodiesterase Rv1357c fbiA (requalified) — 2-phospho-L-lactate transferase fbiA thiG (requalified) — thiazole synthase thiG thiC (requalified) — phosphomethylpyrimidine synthase ThiC thiC thiE (requalified) — thiamine phosphate synthase thiE yrbE1B (family_assigned) — ABC transporter permease yrbE1B yrbE3A (family_assigned) — ABC transporter permease yrbE3A Rv0588 (family_assigned) — ABC transporter permease Rv0588 yrbE4B (family_assigned) — ABC transporter permease yrbE4B yrbE3B (family_assigned) — ABC transporter permease yrbE3B rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA Rv0518 (family_assigned) — SGNH/GDSL hydrolase family protein Rv0518 Rv3779 (family_assigned) — DUF6541 family protein Rv3779 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c egtE (requalified) — ergothioneine biosynthesis PLP-dependent enzyme Eg egtE

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.