MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0513 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0513 (family_assigned) — DUF3093 domain-containing protein Rv0513 Rv0514 (dark) — hypothetical protein Rv0514 hemD (requalified) — uroporphyrin-III C-methyltransferase hemD hemC (requalified) — hydroxymethylbilane synthase hemC hemB (requalified) — porphobilinogen synthase hemB hemA (requalified) — glutamyl-tRNA reductase hemA ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA lppL (family_assigned) — hypothetical protein lppL eccE5 (family_assigned) — type VII secretion system ESX-5 subunit EccE5 eccE5 rho (requalified) — transcription termination factor Rho rho pknA (requalified) — serine/threonine protein kinase PknA pknA Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c Rv3220c (family_assigned) — histidine kinase N-terminal domain-containing prot Rv3220c Rv0528 (requalified) — cytochrome c biogenesis protein ResB Rv0528 cysG (requalified) — uroporphyrinogen-III C-methyltransferase cysG cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ hemE (requalified) — uroporphyrinogen decarboxylase hemE Rv0260c (requalified) — uroporphyrinogen-III synthase Rv0260c hemL (requalified) — glutamate-1-semialdehyde 2%2C1-aminomutase hemL gltS (requalified) — glutamate--tRNA ligase gltS Rv0508 (family_assigned) — glutaredoxin family protein Rv0508 Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 dprE1 (requalified) — decaprenylphospho-beta-D-ribofuranose 2-dehydrogen dprE1 glf (requalified) — UDP-galactopyranose mutase glf lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv2743c (family_assigned) — hypothetical protein Rv2743c Rv0431 (requalified) — tuberculin-like peptide Rv0431 mycP5 (requalified) — type VII secretion system ESX-5 serine protease my mycP5 eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5 eccA5 (family_assigned) — type VII secretion system ESX-5 AAA family ATPase eccA5 Rv0176 (family_assigned) — RDD family protein Rv0176 mltG (requalified) — endolytic transglycosylase MltG mltG rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpmE (requalified) — 50S ribosomal protein L31 rpmE gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI yidC (requalified) — membrane protein insertase YidC yidC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.