MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0507 · 46 genes shown · anchor mmpS2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
mmpL2 (requalified) — RND transporter MmpL2 mmpL2 mmpS2 (family_assigned) — MmpS family protein mmpS2 Rv0508 (family_assigned) — glutaredoxin family protein Rv0508 Rv1598c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1598c Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 hemA (requalified) — glutamyl-tRNA reductase hemA eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 hemC (requalified) — hydroxymethylbilane synthase hemC lppX (requalified) — LppX_LprAFG lipoprotein lppX Rv1145 (requalified) — transmembrane transport protein Rv1145 Rv0128 (family_assigned) — YoaK family protein Rv0128 hemD (requalified) — uroporphyrin-III C-methyltransferase hemD PPE2 (family_assigned) — PPE family protein PPE2 PPE2 serB1 (requalified) — phosphoserine phosphatase SerB serB1 nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 mmpL9 (requalified) — RND transporter MmpL9 mmpL9 mmpL4 (requalified) — transmembrane transport protein MmpL4 mmpL4 mmpL1 (requalified) — RND transporter MmpL1 mmpL1 atpB (family_assigned) — F0F1 ATP synthase subunit A atpB atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA hemL (requalified) — glutamate-1-semialdehyde 2%2C1-aminomutase hemL hemB (requalified) — porphobilinogen synthase hemB gltS (requalified) — glutamate--tRNA ligase gltS eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 cysG (requalified) — uroporphyrinogen-III C-methyltransferase cysG hemE (requalified) — uroporphyrinogen decarboxylase hemE Rv0260c (requalified) — uroporphyrinogen-III synthase Rv0260c pks1 (requalified) — polyketide synthase pks1 mmpL7 (requalified) — phthiocerol dimycocerosate RND transporter MmpL7 mmpL7 PPE42 (family_assigned) — PPE family protein PPE42 PPE42 PPE13 (family_assigned) — PPE family protein PPE13 PPE13 papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 PPE10 (family_assigned) — PPE family protein PPE10 PPE10 Rv1146 (requalified) — transmembrane transport protein Rv1146 rslA (requalified) — anti-sigma-L factor RslA rslA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.