MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0500 · 44 genes shown · anchor proB · open gene page → · ← back to 1 hop

Evidence: Min score 0
proC (requalified) — pyrroline-5-carboxylate reductase proC Rv1188 (requalified) — proline dehydrogenase Rv1188 rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA pip (family_assigned) — proline-specific peptidase family protein pip Rv0499 (family_assigned) — thioesterase family protein Rv0499 proB (requalified) — glutamate 5-kinase proB Rv0498 (requalified) — sugar phosphate isomerase/epimerase Rv0498 Rv0496 (family_assigned) — hypothetical protein Rv0496 Rv0497 (family_assigned) — hypothetical protein Rv0497 proA (requalified) — glutamate-5-semialdehyde dehydrogenase proA Rv0500A (family_assigned) — DNA-binding protein Rv0500A Rv0495c (family_assigned) — hypothetical protein Rv0495c Rv0500B (family_assigned) — Conserved hypothetical protein Rv0500B Rv1186c (family_assigned) — PucR family transcriptional regulator Rv1186c aldC (requalified) — aldehyde dehydrogenase AldC aldC Rv1249c (family_assigned) — hypothetical protein Rv1249c rocD1 (family_assigned) — Probable ornithine aminotransferase (N-terminus pa rocD1 gltB (family_assigned) — glutamate synthase large subunit gltB gadB (requalified) — glutamate decarboxylase gadB gltD (family_assigned) — glutamate synthase subunit beta gltD gdh (requalified) — NAD-glutamate dehydrogenase gdh mas (requalified) — mycocerosate synthase mas ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks12 (requalified) — type I polyketide synthase pks12 Rv2360c (family_assigned) — hypothetical protein Rv2360c obg (requalified) — GTPase ObgE obg rpmA (requalified) — 50S ribosomal protein L27 rpmA Rv1752 (family_assigned) — hypothetical protein Rv1752 ppx2 (requalified) — exopolyphosphatase Ppx2 ppx2 relA (family_assigned) — RelA/SpoT family protein relA Rv0996 (family_assigned) — hypothetical protein Rv0996 purQ (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purQ atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA Rv2426c (family_assigned) — MoxR family ATPase Rv2426c Rv0428c (family_assigned) — GNAT family N-acetyltransferase Rv0428c Rv2616 (family_assigned) — DUF1990 family protein Rv2616 Rv3818 (requalified) — MBL fold metallo-hydrolase Rv3818 rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsB (requalified) — 30S ribosomal protein S2 rpsB rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rplP (requalified) — 50S ribosomal protein L16 rplP rplK (requalified) — 50S ribosomal protein L11 rplK

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.