MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0480c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0480c (family_assigned) — carbon-nitrogen hydrolase family protein Rv0480c Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c Rv0481c (family_assigned) — DUF2505 domain-containing protein Rv0481c murB (requalified) — UDP-N-acetylmuramate dehydrogenase murB lprQ (requalified) — L%2CD-transpeptidase LdtMt5 lprQ pgmA (requalified) — phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosp pgmA icd1 (requalified) — NADP-dependent isocitrate dehydrogenase icd1 pepE (family_assigned) — Xaa-Pro peptidase family protein pepE pepQ (family_assigned) — Xaa-Pro peptidase family protein pepQ cdd (requalified) — cytidine deaminase cdd Rv2365c (requalified) — cytidine deaminase Rv2365c pepN (requalified) — aminopeptidase PepN pepN Rv2189c (dark) — hypothetical protein Rv2189c Rv0227c (family_assigned) — membrane protein Rv0227c pirG (requalified) — exported repetitive protein pirG Rv1476 (family_assigned) — DUF6676 family protein Rv1476 PPE2 (family_assigned) — PPE family protein PPE2 PPE2 Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv1109c (requalified) — lipid droplet-associated protein Rv1109c murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC murA (requalified) — UDP-N-acetylglucosamine 1-carboxyvinyltransferase murA murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG Rv1332 (family_assigned) — transcriptional regulator Rv1332 Rv3015c (requalified) — methionine synthase Rv3015c Rv0990c (family_assigned) — SAF domain-containing protein Rv0990c glgP (family_assigned) — glycosyltransferase family 1 protein glgP pgi (requalified) — glucose-6-phosphate isomerase pgi glgA (requalified) — glycogen synthase glgA tkt (requalified) — transketolase tkt malQ (requalified) — 4-alpha-glucanotransferase malQ glgC (requalified) — glucose-1-phosphate adenylyltransferase glgC acn (requalified) — iron-regulated aconitate hydratase Acn acn Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c icd2 (requalified) — NADP-dependent isocitrate dehydrogenase icd2 Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c mdh (requalified) — malate dehydrogenase mdh Rv2090 (requalified) — 5'-3' exonuclease Rv2090 nadE (requalified) — NAD(+) synthase nadE Rv0730 (requalified) — GCN5-like N-acetyltransferase Rv0730 serA1 (requalified) — D-3-phosphoglycerate dehydrogenase serA1 trpS (requalified) — tryptophan--tRNA ligase trpS efp (requalified) — elongation factor P efp Rv2532c (requalified) — antitermination protein NusB Rv2532c nusB (requalified) — transcription antitermination factor NusB nusB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.