MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0479c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c Rv0480c (family_assigned) — carbon-nitrogen hydrolase family protein Rv0480c Rv0481c (family_assigned) — DUF2505 domain-containing protein Rv0481c Rv0227c (family_assigned) — membrane protein Rv0227c pirG (requalified) — exported repetitive protein pirG Rv1476 (family_assigned) — DUF6676 family protein Rv1476 PPE2 (family_assigned) — PPE family protein PPE2 PPE2 Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c lprC (family_assigned) — DUF3558 domain-containing protein lprC lpqB (requalified) — MtrAB system accessory lipoprotein LpqB lpqB lmeA (requalified) — mannan chain length control protein LmeA lmeA Rv2342 (family_assigned) — hypothetical protein Rv2342 Rv2743c (family_assigned) — hypothetical protein Rv2743c murB (requalified) — UDP-N-acetylmuramate dehydrogenase murB lprQ (requalified) — L%2CD-transpeptidase LdtMt5 lprQ pgmA (requalified) — phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosp pgmA icd1 (requalified) — NADP-dependent isocitrate dehydrogenase icd1 Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv1109c (requalified) — lipid droplet-associated protein Rv1109c mmpA (requalified) — hypothetical protein mmpA Rv3668c (requalified) — protease Rv3668c Rv0228 (requalified) — acyltransferase Rv0228 Rv0312 (family_assigned) — Hsp70 family protein Rv0312 fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA Rv1158c (dark) — hypothetical protein Rv1158c mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv3802c (requalified) — phospholipase Rv3802c Rv3035 (family_assigned) — hypothetical protein Rv3035 lprB (family_assigned) — DUF3558 domain-containing protein lprB embA (requalified) — arabinosyltransferase EmbA embA cobQ1 (requalified) — cobyric acid synthase cobQ1 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv1157c (dark) — hypothetical protein Rv1157c ripB (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipB ripB rplS (requalified) — 50S ribosomal protein L19 rplS rplT (requalified) — 50S ribosomal protein L20 rplT rplQ (requalified) — 50S ribosomal protein L17 rplQ rpmA (requalified) — 50S ribosomal protein L27 rpmA rplU (requalified) — 50S ribosomal protein L21 rplU mtrB (requalified) — two-component system sensor histidine kinase MtrB mtrB mtrA (requalified) — two-component system response regulator MtrA mtrA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.