MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0478 · 42 genes shown · anchor rbsK · open gene page → · ← back to 1 hop

Evidence: Min score 0
deoC (requalified) — deoxyribose-phosphate aldolase deoC rbsK (requalified) — ribokinase RbsK rbsK deoA (requalified) — thymidine phosphorylase deoA tkt (requalified) — transketolase tkt tal (requalified) — transaldolase tal fba (requalified) — class II fructose-bisphosphate aldolase fba Rv0476 (requalified) — transmembrane protein Rv0476 Rv0477 (dark) — DUF2599 domain-containing protein Rv0477 tpi (requalified) — triose-phosphate isomerase tpi gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap pgi (requalified) — glucose-6-phosphate isomerase pgi eno (requalified) — phosphopyruvate hydratase eno ppdK (requalified) — pyruvate%2C phosphate dikinase ppdK prsA (requalified) — ribose-phosphate diphosphokinase prsA pgmA (requalified) — phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosp pgmA rpiB (requalified) — ribose-5-phosphate isomerase B rpiB snzP (family_assigned) — pyridoxal 5'-phosphate synthase lyase subunit PdxS snzP cdd (requalified) — cytidine deaminase cdd upp (requalified) — uracil phosphoribosyltransferase upp deoD (requalified) — purine-nucleoside phosphorylase deoD add (requalified) — adenosine deaminase add pyrR (family_assigned) — bifunctional pyr operon transcriptional regulator/ pyrR rpe (requalified) — ribulose-phosphate 3-epimerase rpe zwf2 (requalified) — glucose-6-phosphate dehydrogenase zwf2 glpX (requalified) — class II fructose-bisphosphatase glpX pfkB (family_assigned) — 1-phosphofructokinase family hexose kinase pfkB pfkA (requalified) — ATP-dependent 6-phosphofructokinase pfkA hbhA (requalified) — heparin-binding hemagglutinin HbhA hbhA Rv0474 (family_assigned) — helix-turn-helix transcriptional regulator Rv0474 Rv0473 (dark) — DUF445 domain-containing protein Rv0473 Rv0472c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0472c cut5b (family_assigned) — Probable cutinase [second part] Cut5b cut5b eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 pgk (requalified) — phosphoglycerate kinase pgk fucA (requalified) — L-fuculose-phosphate aldolase fucA pykA (requalified) — pyruvate kinase pykA gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 Rv1126c (family_assigned) — MarR family transcriptional regulator Rv1126c Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c mez (requalified) — NAD-dependent malic enzyme mez pca (requalified) — pyruvate carboxylase pca Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.