MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0470A · 42 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0470A (family_assigned) — hypothetical protein Rv0470A Rv0471c (requalified) — 1%2C4-dihydroxy-2-naphthoate prenyltransferase Rv0471c Rv0472c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0472c PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 Rv2209 (requalified) — MFS transporter Rv2209 Rv1004c (family_assigned) — hypothetical protein Rv1004c iniB (requalified) — isoniazid-induced protein IniB iniB PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 Rv0473 (dark) — DUF445 domain-containing protein Rv0473 pcaA (requalified) — cyclopropane mycolic acid synthase pcaA Rv0474 (family_assigned) — helix-turn-helix transcriptional regulator Rv0474 hbhA (requalified) — heparin-binding hemagglutinin HbhA hbhA Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c Rv0476 (requalified) — transmembrane protein Rv0476 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 espE (requalified) — type VII secretion system ESX-1 associated protein espE PPE54 (family_assigned) — PPE family protein PPE54 PPE54 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 rplD (requalified) — 50S ribosomal protein L4 rplD ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY rpsB (requalified) — 30S ribosomal protein S2 rpsB rplJ (requalified) — 50S ribosomal protein L10 rplJ rplX (requalified) — 50S ribosomal protein L24 rplX rplW (requalified) — 50S ribosomal protein L23 rplW iniA (requalified) — isoniazid inductible protein IniA iniA iniC (requalified) — isoniazid-induced dynamin-like GTPase IniC iniC Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c PPE21 (family_assigned) — PPE family protein PPE21 PPE21 PPE62 (family_assigned) — PPE family protein PPE62 PPE62 csm4 (requalified) — type III-A CRISPR-associated RAMP protein Csm4 csm4 csm3 (requalified) — type III-A CRISPR-associated RAMP protein Csm3 csm3 csm2 (requalified) — type III-A CRISPR-associated protein Csm2 csm2 cas10 (requalified) — type III-A CRISPR-associated protein Cas10/Csm1 cas10 Rv2824c (requalified) — CRISPR-associated endoribonuclease Cas6 Rv2824c Rv2818c (requalified) — CRISPR-associated protein Csm6 Rv2818c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.