MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0461 · 46 genes shown · anchor lpdC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0461 (requalified) — transmembrane protein Rv0461 Rv0460 (family_assigned) — hypothetical protein Rv0460 lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0463 (dark) — hypothetical protein Rv0463 Rv0459 (family_assigned) — DUF779 domain-containing protein Rv0459 Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458 Rv0457c (family_assigned) — prolyl oligopeptidase family protein Rv0457c Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 moaE1 (family_assigned) — molybdopterin synthase catalytic subunit 1 moaE1 Rv2781c (requalified) — nitronate monooxygenase Rv2781c Rv0424c (dark) — hypothetical protein Rv0424c mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 Rv0560c (requalified) — benzoquinone methyltransferase Rv0560c Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC bkdA (family_assigned) — pyruvate dehydrogenase (acetyl-transferring) E1 co bkdA gcvH (requalified) — glycine cleavage system protein GcvH gcvH acs (requalified) — acetate--CoA ligase acs ackA (requalified) — acetate kinase ackA adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 adhB (requalified) — alcohol dehydrogenase B adhB adh (requalified) — zinc-binding dehydrogenase adh ptrBa (family_assigned) — Probable protease II PtrBa [first part] (oligopept ptrBa echA2 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA2 Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 vapC2 (family_assigned) — PIN domain nuclease vapC2 PE_PGRS5 (family_assigned) — PE-PGRS family protein PE_PGRS5 PE_PGRS5 Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0303 (requalified) — protochlorophyllide reductase Rv0303 moaD2 (family_assigned) — molybdopterin synthase subunit MoaD2 moaD2 moaC1 (requalified) — cyclic pyranopterin monophosphate synthase accesso moaC1 moaD1 (requalified) — molybdenum cofactor biosynthesis protein MoaD moaD1 moaC3 (requalified) — cyclic pyranopterin monophosphate synthase MoaC moaC3 moaC2 (requalified) — cyclic pyranopterin monophosphate synthase MoaC moaC2 cysO (requalified) — sulfur carrier protein CysO cysO Rv0021c (family_assigned) — nitronate monooxygenase family protein Rv0021c narU (family_assigned) — NarK family nitrate/nitrite MFS transporter narU narK3 (requalified) — nitrate/nitrite transporter narK3 narK2 (requalified) — nitrate transporter NarK narK2 narK1 (requalified) — nitrate/nitrite transporter narK1 narI (family_assigned) — respiratory nitrate reductase subunit gamma narI Rv0426c (dark) — hypothetical protein Rv0426c ctpH (requalified) — cation-translocating P-type ATPase ctpH

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.