MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0455c · 46 genes shown · anchor echA2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0455c (family_assigned) — DUF5078 domain-containing protein Rv0455c echA2 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA2 Rv0457c (family_assigned) — prolyl oligopeptidase family protein Rv0457c Rv0397A (dark) — hypothetical protein Rv0397A Rv0559c (family_assigned) — DUF732 domain-containing protein Rv0559c Rv0338c (requalified) — heterodisulfide reductase-related iron-sulfur bind Rv0338c gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 hemD (requalified) — uroporphyrin-III C-methyltransferase hemD mmpS5 (requalified) — siderophore transporter accessory protein MmpS5 mmpS5 mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 Rv0560c (requalified) — benzoquinone methyltransferase Rv0560c ppdK (requalified) — pyruvate%2C phosphate dikinase ppdK murI (requalified) — glutamate racemase murI fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458 Rv0459 (family_assigned) — DUF779 domain-containing protein Rv0459 ptrBa (family_assigned) — Probable protease II PtrBa [first part] (oligopept ptrBa Rv0460 (family_assigned) — hypothetical protein Rv0460 Rv0461 (requalified) — transmembrane protein Rv0461 Rv0397 (family_assigned) — hypothetical protein Rv0397 menJ (requalified) — menaquinone reductase menJ grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 Rv2536 (family_assigned) — B-4DMT family transporter Rv2536 secE2 (family_assigned) — protein translocase subunit SecE secE2 rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap aspC (requalified) — pyridoxal phosphate-dependent aminotransferase aspC echA3 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA3 fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB pgk (requalified) — phosphoglycerate kinase pgk eno (requalified) — phosphopyruvate hydratase eno serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 fba (requalified) — class II fructose-bisphosphate aldolase fba pgi (requalified) — glucose-6-phosphate isomerase pgi serA1 (requalified) — D-3-phosphoglycerate dehydrogenase serA1 hemC (requalified) — hydroxymethylbilane synthase hemC hemB (requalified) — porphobilinogen synthase hemB cysG (requalified) — uroporphyrinogen-III C-methyltransferase cysG hemA (requalified) — glutamyl-tRNA reductase hemA cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.