MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0433 · 44 genes shown · anchor sodC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0433 (requalified) — glutamate--cysteine ligase Rv0433 ggtA (requalified) — bifunctional cephalosporin acylase/gamma-glutamylt ggtA sodC (family_assigned) — superoxide dismutase family protein sodC ggtB (family_assigned) — gamma-glutamyltransferase family protein ggtB gshA (requalified) — ergothioneine biosynthesis glutamate--cysteine lig gshA pepN (requalified) — aminopeptidase PepN pepN pepB (requalified) — leucyl aminopeptidase pepB oplA (family_assigned) — hydantoinase B/oxoprolinase family protein oplA Rv2411c (requalified) — circularly permuted type 2 ATP-grasp protein Rv2411c Rv0431 (requalified) — tuberculin-like peptide Rv0431 Rv0434 (family_assigned) — LON peptidase substrate-binding domain-containing Rv0434 napA (requalified) — DUF3263 domain-containing protein napA rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA gadB (requalified) — glutamate decarboxylase gadB Rv2876 (requalified) — transmembrane protein Rv2876 qcrA (requalified) — hypothetical protein qcrA qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC che1 (requalified) — ferrochelatase che1 cysH (requalified) — phosphoadenylyl-sulfate reductase cysH sirA (requalified) — sulfite reductase sirA etgB (requalified) — ergothioneine biosynthesis protein EgtB etgB egtC (requalified) — ergothioneine biosynthesis protein EgtC egtC egtD (requalified) — L-histidine N(alpha)-methyltransferase egtD glyA1 (requalified) — serine hydroxymethyltransferase glyA1 Rv2212 (requalified) — adenylyl cyclase Rv2212 Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c gdh (requalified) — NAD-glutamate dehydrogenase gdh Rv2410c (family_assigned) — alpha-E domain-containing protein Rv2410c Rv2409c (family_assigned) — transglutaminase family protein Rv2409c Rv2566 (family_assigned) — hypothetical protein Rv2566 Rv2569c (family_assigned) — transglutaminase family protein Rv2569c rpsT (requalified) — 30S ribosomal protein S20 rpsT Rv2732c (family_assigned) — hypothetical protein Rv2732c lppL (family_assigned) — hypothetical protein lppL Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv1278 (family_assigned) — AAA family ATPase Rv1278 def (requalified) — peptide deformylase def Rv0428c (family_assigned) — GNAT family N-acetyltransferase Rv0428c Rv1188 (requalified) — proline dehydrogenase Rv1188 rocD1 (family_assigned) — Probable ornithine aminotransferase (N-terminus pa rocD1 gltB (family_assigned) — glutamate synthase large subunit gltB gltD (family_assigned) — glutamate synthase subunit beta gltD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.