MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0407 · 43 genes shown · anchor pta · open gene page → · ← back to 1 hop

Evidence: Min score 0
fgd1 (requalified) — glucose-6-phosphate dehydrogenase (coenzyme-F420) fgd1 pta (requalified) — phosphate acetyltransferase pta ackA (requalified) — acetate kinase ackA Rv0406c (family_assigned) — beta lactamase-like protein Rv0406c Rv0044c (requalified) — LLM class F420-dependent oxidoreductase Rv0044c fbiA (requalified) — 2-phospho-L-lactate transferase fbiA ddn (requalified) — deazaflavin-dependent nitroreductase Ddn ddn Rv3178 (requalified) — nitroreductase Rv3178 Rv1558 (requalified) — F420H(2)-dependent quinone reductase Rv1558 Rv1261c (requalified) — F420H(2)-dependent quinone reductase Rv1261c cofC (requalified) — 2-phospho-L-lactate guanylyltransferase cofC fbiB (requalified) — coenzyme F420-0:L-glutamate ligase fbiB Rv2161c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv2161c glcB (requalified) — malate synthase G glcB Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC acs (requalified) — acetate--CoA ligase acs Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd aldA (requalified) — aldehyde dehydrogenase aldA Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c Rv0331 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0331 truA (requalified) — tRNA pseudouridine synthase A truA Rv2367c (requalified) — endoribonuclease Rv2367c Rv0045c (family_assigned) — alpha/beta hydrolase Rv0045c ino1 (requalified) — inositol-3-phosphate synthase ino1 Rv0043c (family_assigned) — GntR family transcriptional regulator Rv0043c fgd2 (requalified) — F420-dependent hydroxymycolic acid dehydrogenase fgd2 fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 Rv3520c (requalified) — coenzyme F420-dependent oxidoreductase Rv3520c Rv1855c (requalified) — LLM class F420-dependent oxidoreductase Rv1855c Rv2951c (requalified) — phthiodiolone/phenolphthiodiolone dimycocerosates Rv2951c mmpL6 (requalified) — transmembrane transport protein MmpL6 mmpL6 ilvA (requalified) — threonine ammonia-lyase ilvA Rv1262c (family_assigned) — HIT family protein Rv1262c ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 Rv3093c (requalified) — LLM class F420-dependent oxidoreductase Rv3093c Rv3300c (family_assigned) — RluA family pseudouridine synthase Rv3300c Rv2160A (family_assigned) — Conserved hypothetical protein Rv2160A Rv2160c (family_assigned) — Conserved hypothetical protein Rv2160c Rv2159c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv2159c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.