MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0403c · 46 genes shown · anchor mmpL1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
mmpS1 (family_assigned) — MmpS family protein mmpS1 mmpL1 (requalified) — RND transporter MmpL1 mmpL1 fadD30 (requalified) — long-chain-fatty-acid--AMP ligase FadD30 fadD30 pks6 (requalified) — membrane bound polyketide synthase pks6 Rv1754c (requalified) — DUF4185 domain-containing protein Rv1754c tyzA (requalified) — hypothetical protein tyzA Rv3096 (requalified) — 1%2C4-beta-xylanase Rv3096 idsB (family_assigned) — polyprenyl synthetase family protein idsB Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv1682 (family_assigned) — hypothetical protein Rv1682 ctpD (requalified) — cobalt-translocating P-type ATPase CtpD ctpD Rv0176 (family_assigned) — RDD family protein Rv0176 lpqQ (family_assigned) — sensor domain-containing protein lpqQ Rv1598c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1598c Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv0128 (family_assigned) — YoaK family protein Rv0128 Rv1145 (requalified) — transmembrane transport protein Rv1145 mbtE (requalified) — peptide synthetase mbtE mbtF (requalified) — peptide synthetase mbtF nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 fas (requalified) — fatty acid synthase fas mbtB (requalified) — phenyloxazoline synthase MbtB mbtB fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD Rv3668c (requalified) — protease Rv3668c spmT (requalified) — sphingomyelinase spmT Rv0312 (family_assigned) — Hsp70 family protein Rv0312 Rv0431 (requalified) — tuberculin-like peptide Rv0431 rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv3707c (requalified) — hypothetical protein Rv3707c csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 PPE44 (family_assigned) — PPE family protein PPE44 PPE44 Rv0963c (family_assigned) — hypothetical protein Rv0963c esxH (requalified) — type VII secretion system effector EsxH esxH Rv3717 (family_assigned) — hypothetical protein Rv3717 Rv3209 (family_assigned) — MmpS family transport accessory protein Rv3209 Rv0063 (requalified) — FAD-binding oxidoreductase Rv0063 Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 Rv3094c (family_assigned) — acyl-CoA dehydrogenase family protein Rv3094c Rv2120c (family_assigned) — glycine zipper 2TM domain-containing protein Rv2120c Rv3382c (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Rv3382c Rv1086 (family_assigned) — undecaprenyl diphosphate synthase family protein Rv1086 grcC2 (requalified) — polyprenyl-diphosphate synthase GrcC grcC2 grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.