MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0401 · 46 genes shown · anchor fadE7 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0401 (dark) — DUF3054 domain-containing protein Rv0401 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 lpqK (family_assigned) — serine hydrolase domain-containing protein lpqK Rv0398c (family_assigned) — hypothetical protein Rv0398c Rv3399 (requalified) — S-adenosylmethionine-dependent methyltransferase Rv3399 Rv0360c (family_assigned) — hypothetical protein Rv0360c qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv0204c (family_assigned) — TIGR00374 family protein Rv0204c ephG (requalified) — epoxide hydrolase ephG Rv0921 (family_assigned) — IS607-like element IS1535 family transposase Rv0921 Rv2886c (requalified) — resolvase Rv2886c Rv3828c (requalified) — resolvase Rv3828c Rv2566 (family_assigned) — hypothetical protein Rv2566 ltp1 (requalified) — lipid-transfer protein ltp1 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadB (requalified) — fatty oxidation protein FadB fadB fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 Rv0907 (family_assigned) — hypothetical protein Rv0907 otsB2 (requalified) — trehalose-phosphatase otsB2 Rv2305 (family_assigned) — hypothetical protein Rv2305 phyA (requalified) — presqualene diphosphate synthase HpnD phyA idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 Rv3400 (family_assigned) — beta-phosphoglucomutase family hydrolase Rv3400 Rv3401 (family_assigned) — glycoside hydrolase family 65 protein Rv3401 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA mca (requalified) — mycothiol conjugate amidase Mca mca Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c Rv0361 (family_assigned) — hypothetical protein Rv0361 mshD (requalified) — mycothiol synthase mshD Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c Rv2260 (requalified) — MBL fold metallo-hydrolase Rv2260 ctaE (family_assigned) — heme-copper oxidase subunit III ctaE qcrC (requalified) — cytochrome c qcrC qcrA (requalified) — hypothetical protein qcrA ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC Rv0205 (family_assigned) — AI-2E family transporter Rv0205 Rv0128 (family_assigned) — YoaK family protein Rv0128 Rv0955 (family_assigned) — DUF6350 family protein Rv0955 aftD (family_assigned) — DUF3367 domain-containing protein aftD Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv3618 (requalified) — LLM class flavin-dependent oxidoreductase Rv3618 Rv2739c (requalified) — glycosyltransferase Rv2739c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.