MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0399c · 45 genes shown · anchor fadE7 · open gene page → · ← back to 1 hop

Evidence: Min score 0
lpqK (family_assigned) — serine hydrolase domain-containing protein lpqK fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 Rv0398c (family_assigned) — hypothetical protein Rv0398c Rv0907 (family_assigned) — hypothetical protein Rv0907 Rv0401 (dark) — DUF3054 domain-containing protein Rv0401 otsB2 (requalified) — trehalose-phosphatase otsB2 Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv1367c (family_assigned) — hypothetical protein Rv1367c Rv1215c (family_assigned) — CocE/NonD family hydrolase Rv1215c lpqI (requalified) — lipoprotein LpqI lpqI lprF (requalified) — lipoprotein LprF lprF dacB (requalified) — D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-ala dacB lppR (family_assigned) — sensor domain-containing protein lppR ltp1 (requalified) — lipid-transfer protein ltp1 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadB (requalified) — fatty oxidation protein FadB fadB fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 ctpE (requalified) — cation-translocating P-type ATPase ctpE Rv0906 (requalified) — MBL fold metallo-hydrolase Rv0906 echA6 (requalified) — enoyl-CoA hydratase echA6 Rv0909 (requalified) — antitoxin Rv0909 accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 Rv3399 (requalified) — S-adenosylmethionine-dependent methyltransferase Rv3399 Rv0360c (family_assigned) — hypothetical protein Rv0360c qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB otsA (requalified) — trehalose-6-phosphate synthase otsA otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 Rv2402 (requalified) — trehalase Rv2402 treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ treS (requalified) — maltose alpha-D-glucosyltransferase treS Rv3401 (family_assigned) — glycoside hydrolase family 65 protein Rv3401 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv2306A (family_assigned) — Possible conserved membrane protein Rv2306A PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 iniB (requalified) — isoniazid-induced protein IniB iniB Rv2306B (family_assigned) — Possible conserved membrane protein Rv2306B lipP (family_assigned) — serine hydrolase domain-containing protein lipP lipD (requalified) — lipase LipD lipD Rv1377c (requalified) — class I SAM-dependent methyltransferase Rv1377c pyrC (requalified) — dihydroorotase pyrC pyrB (family_assigned) — aspartate carbamoyltransferase catalytic subunit pyrB pyrR (family_assigned) — bifunctional pyr operon transcriptional regulator/ pyrR Rv1217c (family_assigned) — multidrug efflux ABC transporter permease Rv1217c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.