MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0379 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
secE2 (family_assigned) — protein translocase subunit SecE secE2 Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 Rv0378 (dark) — hypothetical protein Rv0378 Rv3091 (family_assigned) — patatin-like phospholipase family protein Rv3091 secY (family_assigned) — preprotein translocase subunit SecY secY secG (family_assigned) — preprotein translocase subunit SecG secG secF (family_assigned) — protein translocase subunit SecF secF tatA (family_assigned) — Sec-independent protein translocase subunit TatA tatA secE1 (requalified) — preprotein translocase SecE secE1 secD (family_assigned) — protein translocase subunit SecD secD Rv0559c (family_assigned) — DUF732 domain-containing protein Rv0559c Rv0372c (family_assigned) — XdhC family protein Rv0372c Rv0368c (family_assigned) — VWA domain-containing protein Rv0368c Rv0375c (family_assigned) — carbon monoxyde dehydrogenase medium subunit Rv0375c embR (requalified) — response regulator transcription factor EmbR embR Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS PE_PGRS42 (family_assigned) — PE-PGRS family protein PE_PGRS42 PE_PGRS42 Rv3090 (family_assigned) — SPFH domain-containing protein Rv3090 Rv1157c (dark) — hypothetical protein Rv1157c PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 rplR (requalified) — 50S ribosomal protein L18 rplR rplE (requalified) — 50S ribosomal protein L5 rplE rpsC (requalified) — 30S ribosomal protein S3 rpsC rplF (requalified) — 50S ribosomal protein L6 rplF rplV (requalified) — 50S ribosomal protein L22 rplV yidC (requalified) — membrane protein insertase YidC yidC secA1 (family_assigned) — protein translocase subunit SecA secA1 secA2 (requalified) — accessory Sec system translocase SecA2 secA2 ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY Rv2585c (family_assigned) — ABC transporter substrate-binding protein Rv2585c yajC (family_assigned) — preprotein translocase subunit YajC yajC apt (requalified) — adenine phosphoribosyltransferase apt tatC (family_assigned) — twin-arginine translocase subunit TatC tatC guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA pafA (requalified) — Pup--protein ligase pafA pafB (family_assigned) — YafY family protein pafB pafC (family_assigned) — YafY family protein pafC helY (requalified) — RNA helicase helY nusG (requalified) — transcription termination/antitermination protein nusG rplK (requalified) — 50S ribosomal protein L11 rplK rplA (requalified) — 50S ribosomal protein L1 rplA pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT menJ (requalified) — menaquinone reductase menJ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.