MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0353 · 46 genes shown · anchor dnaJ1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
hspR (family_assigned) — heat shock transcriptional regulator HspR hspR dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1 dnaK (requalified) — molecular chaperone DnaK dnaK grpE (requalified) — nucleotide exchange factor GrpE grpE dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 glnA2 (family_assigned) — glutamine synthetase family protein glnA2 glnA4 (family_assigned) — glutamine synthetase family protein glnA4 phoP (requalified) — two-component system response regulator PhoP phoP rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 glnA3 (family_assigned) — glutamine synthetase family protein glnA3 sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA htpG (requalified) — molecular chaperone HtpG htpG Rv2264c (family_assigned) — Hsp70 family protein Rv2264c Rv0312 (family_assigned) — Hsp70 family protein Rv0312 clpB (requalified) — chaperone protein ClpB clpB groEL2 (requalified) — chaperonin GroEL groEL2 Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv2372c (requalified) — 16S rRNA (uracil(1498)-N(3))-methyltransferase Rv2372c hrcA (requalified) — heat-inducible transcriptional repressor HrcA hrcA gltB (family_assigned) — glutamate synthase large subunit gltB glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB gltD (family_assigned) — glutamate synthase subunit beta gltD purF (requalified) — amidophosphoribosyltransferase purF Rv2857c (requalified) — 3-oxoacyl-ACP reductase Rv2857c Rv2859c (requalified) — gamma-glutamyl-gamma-aminobutyrate hydrolase Rv2859c aldC (requalified) — aldehyde dehydrogenase AldC aldC phoR (requalified) — sensory box histidine kinase PhoR phoR Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c prrB (requalified) — two-component system sensor histidine kinase PrrB prrB trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS tcrY (requalified) — two component sensor kinase TcrY tcrY senX3 (requalified) — two-component system sensor histidine kinase SenX3 senX3 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB sigA (requalified) — RNA polymerase sigma factor sigA rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA helZ (requalified) — DEAD/DEAH box helicase helZ rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA Rv1879 (family_assigned) — amidohydrolase family protein Rv1879 ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.