MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0318c · 46 genes shown · anchor pcp · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0318c (family_assigned) — integral membrane protein Rv0318c dipZ (requalified) — integral membrane C-type cytochrome biogenesis pro dipZ pcp (requalified) — pyroglutamyl-peptidase I pcp Rv1749c (family_assigned) — DUF6790 family protein Rv1749c irtA (family_assigned) — iron ABC transporter ATP-binding protein/permease irtA PPE8 (family_assigned) — PPE family protein PPE8 PPE8 sodA (requalified) — superoxide dismutase sodA Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 Rv0320 (family_assigned) — hypothetical protein Rv0320 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 mpt70 (family_assigned) — fasciclin domain-containing protein mpt70 msrA (requalified) — peptide-methionine (S)-S-oxide reductase MsrA msrA ahpC (requalified) — peroxiredoxin AhpC ahpC Rv0794c (requalified) — oxidoreductase Rv0794c sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC dcd (requalified) — dCTP deaminase dcd Rv0263c (family_assigned) — 5-oxoprolinase/urea amidolyase family protein Rv0263c Rv0264c (family_assigned) — allophanate hydrolase subunit 1 Rv0264c Rv3468c (requalified) — dTDP-glucose 4,6-dehydratase Rv3468c PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 irtB (family_assigned) — iron ABC transporter ATP-binding protein/permease irtB mbtB (requalified) — phenyloxazoline synthase MbtB mbtB mbtA (requalified) — bifunctional salicyl-AMP ligase/salicyl-S-ArCP syn mbtA mbtI (requalified) — salicylate synthase mbtI Rv3402c (family_assigned) — DegT/DnrJ/EryC1/StrS family aminotransferase Rv3402c Rv0435c (family_assigned) — AAA family ATPase Rv0435c PPE5 (family_assigned) — PPE family protein PPE5 PPE5 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 rplQ (requalified) — 50S ribosomal protein L17 rplQ rplO (requalified) — 50S ribosomal protein L15 rplO rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rplM (requalified) — 50S ribosomal protein L13 rplM rplC (requalified) — 50S ribosomal protein L3 rplC Rv2367c (requalified) — endoribonuclease Rv2367c dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT lipB (requalified) — lipoyl(octanoyl) transferase LipB lipB lipA (requalified) — lipoyl synthase lipA Rv2219 (family_assigned) — DUF4191 domain-containing protein Rv2219 arcA (requalified) — arginine deiminase arcA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.