MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0315 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0315 (requalified) — family 16 glycosylhydrolase Rv0315 Rv0316 (family_assigned) — muconolactone Delta-isomerase family protein Rv0316 Rv0314c (family_assigned) — membrane protein Rv0314c pirG (requalified) — exported repetitive protein pirG Rv3707c (requalified) — hypothetical protein Rv3707c Rv1987 (family_assigned) — cellulose-binding protein Rv1987 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv2743c (family_assigned) — hypothetical protein Rv2743c Rv2120c (family_assigned) — glycine zipper 2TM domain-containing protein Rv2120c lpqF (requalified) — serine hydrolase lpqF aac (requalified) — aminoglycoside 2'-N-acetyltransferase aac Rv1288 (requalified) — esterase Rv1288 Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c PE_PGRS15 (family_assigned) — PE-PGRS family protein PE_PGRS15 PE_PGRS15 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv0312 (family_assigned) — Hsp70 family protein Rv0312 fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA Rv1158c (dark) — hypothetical protein Rv1158c mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 ask (requalified) — aspartate kinase ask asd (requalified) — aspartate-semialdehyde dehydrogenase asd sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD Rv0518 (family_assigned) — SGNH/GDSL hydrolase family protein Rv0518 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 35kd_ag (family_assigned) — hypothetical protein 35kd_ag lppL (family_assigned) — hypothetical protein lppL chiZ (requalified) — cell wall hydrolase ChiZ chiZ lmeA (requalified) — mannan chain length control protein LmeA lmeA hisG (requalified) — ATP phosphoribosyltransferase hisG hisE (requalified) — phosphoribosyl-ATP pyrophosphatase hisE mhuD (requalified) — mycobilin-forming heme oxygenase MhuD mhuD Rv3591c (family_assigned) — alpha/beta hydrolase Rv3591c Rv0263c (family_assigned) — 5-oxoprolinase/urea amidolyase family protein Rv0263c Rv0264c (family_assigned) — allophanate hydrolase subunit 1 Rv0264c Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c Rv3835 (family_assigned) — septum formation family protein Rv3835 mmpL11 (requalified) — RND transporter MmpL11 mmpL11

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.