MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0301 · 46 genes shown · anchor vapB2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC2 (family_assigned) — PIN domain nuclease vapC2 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298 Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0303 (requalified) — protochlorophyllide reductase Rv0303 PE_PGRS5 (family_assigned) — PE-PGRS family protein PE_PGRS5 PE_PGRS5 vapB41 (requalified) — antitoxin VapB41 vapB41 vapB47 (requalified) — antitoxin VapB47 vapB47 vapB14 (requalified) — antitoxin vapB14 vapC15 (family_assigned) — PIN domain nuclease vapC15 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapB15 (requalified) — antitoxin VapB15 vapB15 Rv1534 (family_assigned) — TetR family transcriptional regulator Rv1534 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 fas (requalified) — fatty acid synthase fas Rv0296c (requalified) — sulfatase Rv0296c Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 htpG (requalified) — molecular chaperone HtpG htpG Rv0073 (family_assigned) — ATP-binding cassette domain-containing protein Rv0073 Rv3354 (requalified) — DUF732 domain-containing protein Rv3354 Rv3103c (dark) — hypothetical protein Rv3103c glnQ (family_assigned) — ATP-binding cassette domain-containing protein glnQ Rv0986 (family_assigned) — ABC transporter ATP-binding protein Rv0986 vapC41 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC41 Rv2600 (family_assigned) — integral membrane protein Rv2600 speE (requalified) — spermidine synthase speE vapC17 (family_assigned) — PIN domain-containing protein vapC17 Rv0229c (family_assigned) — PIN domain nuclease Rv0229c vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 Rv3406 (requalified) — alpha-ketoglutarate-dependent sulfate ester dioxyg Rv3406 vapC8 (family_assigned) — PIN domain-containing protein vapC8 vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 vapC14 (requalified) — ribonuclease VapC14 vapC14 Rv1950c (dark) — hypothetical protein Rv1950c Rv1949c (dark) — Conserved hypothetical protein Rv1949c Rv1951c (dark) — hypothetical protein Rv1951c Rv1948c (family_assigned) — hypothetical protein Rv1948c vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapB11 (requalified) — antitoxin VapB11 vapB11 Rv2008c (family_assigned) — hypothetical protein Rv2008c vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.