MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0276 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0276 (family_assigned) — oxygenase MpaB family protein Rv0276 Rv0275c (family_assigned) — transcriptional regulator Rv0275c Rv0825c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0825c Rv1645c (family_assigned) — oxygenase MpaB family protein Rv1645c Rv1683 (requalified) — acyl-CoA synthetase Rv1683 Rv1132 (family_assigned) — DUF3556 domain-containing protein Rv1132 Rv0826 (family_assigned) — oxygenase MpaB family protein Rv0826 blaI (requalified) — transcriptional repressor BlaI blaI Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv3168 (family_assigned) — phosphotransferase family protein Rv3168 Rv3829c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3829c virS (family_assigned) — AraC family transcriptional regulator virS cobN (family_assigned) — cobaltochelatase subunit CobN cobN Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c Rv1171 (family_assigned) — hypothetical protein Rv1171 adnA (requalified) — ATP-dependent DNA helicase AdnA adnA Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c desA1 (requalified) — acyl-ACP desaturase DesA desA1 dusB (requalified) — tRNA dihydrouridine synthase DusB dusB Rv2237 (family_assigned) — hypothetical protein Rv2237 Rv1647 (requalified) — adenylate cyclase Rv1647 Rv0910 (family_assigned) — SRPBCC family protein Rv0910 Rv1919c (family_assigned) — SRPBCC family protein Rv1919c Rv0135c (family_assigned) — helix-turn-helix domain-containing protein Rv0135c Rv1684 (family_assigned) — Trm112 family protein Rv1684 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC mas (requalified) — mycocerosate synthase mas pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks12 (requalified) — type I polyketide synthase pks12 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 prpC (requalified) — 2-methylcitrate synthase prpC prpD (requalified) — 2-methylcitrate dehydratase prpD Rv3169 (family_assigned) — hypothetical protein Rv3169 Rv1129c (family_assigned) — short-chain fatty acyl-CoA regulator family protei Rv1129c Rv2574 (family_assigned) — SRPBCC family protein Rv2574 Rv1546 (family_assigned) — SRPBCC family protein Rv1546 blaR (family_assigned) — M56 family metallopeptidase blaR guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 gnd1 (requalified) — 6-phosphogluconate dehydrogenase gnd1 Rv1842c (family_assigned) — hemolysin family protein Rv1842c Rv1841c (family_assigned) — hemolysin family protein Rv1841c Rv1847 (family_assigned) — PaaI family thioesterase Rv1847 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv1359 (family_assigned) — transcriptional regulator Rv1359

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.