MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0262c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
aac (requalified) — aminoglycoside 2'-N-acetyltransferase aac Rv0263c (family_assigned) — 5-oxoprolinase/urea amidolyase family protein Rv0263c Rv0264c (family_assigned) — allophanate hydrolase subunit 1 Rv0264c Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c Rv3835 (family_assigned) — septum formation family protein Rv3835 mmpL11 (requalified) — RND transporter MmpL11 mmpL11 Rv1101c (family_assigned) — AI-2E family transporter Rv1101c Rv3909 (dark) — hypothetical protein Rv3909 narK3 (requalified) — nitrate/nitrite transporter narK3 Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 Rv2164c (family_assigned) — hypothetical protein Rv2164c ptrp (family_assigned) — hypothetical protein ptrp Rv1648 (family_assigned) — rhomboid-like protein Rv1648 accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 accA3 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA3 accA2 (family_assigned) — biotin carboxylase N-terminal domain-containing pr accA2 Rv1249c (family_assigned) — hypothetical protein Rv1249c oprA (requalified) — osmosensory protein OprA oprA Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c oplA (family_assigned) — hydantoinase B/oxoprolinase family protein oplA fecB (family_assigned) — iron-siderophore ABC transporter substrate-binding fecB Rv1289 (family_assigned) — hypothetical protein Rv1289 Rv3836 (family_assigned) — metallopeptidase family protein Rv3836 serS (requalified) — serine--tRNA ligase serS Rv2843 (family_assigned) — hypothetical protein Rv2843 Rv0201c (family_assigned) — XRE family transcriptional regulator Rv0201c Rv2264c (family_assigned) — Hsp70 family protein Rv2264c murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ mutT4 (requalified) — NUDIX hydrolase mutT4 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv3906c (requalified) — pullulanase Rv3906c narH (family_assigned) — nitrate reductase subunit beta narH narG (family_assigned) — nitrate reductase subunit alpha narG narX (family_assigned) — respiratory nitrate reductase subunit gamma narX narI (family_assigned) — respiratory nitrate reductase subunit gamma narI nirB (family_assigned) — nitrite reductase large subunit NirB nirB narK2 (requalified) — nitrate transporter NarK narK2 ftsQ (requalified) — cell division protein FtsQ ftsQ eno (requalified) — phosphopyruvate hydratase eno Rv1025 (dark) — hypothetical protein Rv1025 ppx2 (requalified) — exopolyphosphatase Ppx2 ppx2 mfd (requalified) — transcription-repair coupling factor mfd lpqU (requalified) — lytic murein transglycosylase lpqU pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.