MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0250c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0250c (family_assigned) — hypothetical protein Rv0250c Rv0249c (family_assigned) — succinate dehydrogenase membrane anchor subunit Rv0249c Rv0248c (family_assigned) — fumarate reductase/succinate dehydrogenase flavopr Rv0248c Rv0247c (family_assigned) — succinate dehydrogenase/fumarate reductase iron-su Rv0247c Rv0431 (requalified) — tuberculin-like peptide Rv0431 Rv3415c (family_assigned) — hypothetical protein Rv3415c lppL (family_assigned) — hypothetical protein lppL Rv0882 (dark) — DUF2537 domain-containing protein Rv0882 Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c Rv2743c (family_assigned) — hypothetical protein Rv2743c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2732c (family_assigned) — hypothetical protein Rv2732c Rv2360c (family_assigned) — hypothetical protein Rv2360c sdhB (family_assigned) — succinate dehydrogenase iron-sulfur subunit sdhB frdB (family_assigned) — succinate dehydrogenase iron-sulfur subunit frdB sdhA (family_assigned) — succinate dehydrogenase flavoprotein subunit sdhA sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC sdhD (family_assigned) — succinate dehydrogenase hydrophobic membrane ancho sdhD frdA (family_assigned) — fumarate reductase (quinol) flavoprotein subunit frdA napA (requalified) — DUF3263 domain-containing protein napA Rv0433 (requalified) — glutamate--cysteine ligase Rv0433 sodC (family_assigned) — superoxide dismutase family protein sodC Rv0434 (family_assigned) — LON peptidase substrate-binding domain-containing Rv0434 rsdA (requalified) — anti-sigma D factor RsdA rsdA sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD Rv2695 (requalified) — alpha/beta fold hydrolase Rv2695 octT (requalified) — diglucosylglycerate octanoyltransferase octT Rv2186c (requalified) — polyketide cyclase / dehydrase and lipid transport Rv2186c ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv0881 (requalified) — RNA methyltransferase Rv0881 Rv0880 (family_assigned) — MarR family transcriptional regulator Rv0880 Rv0879c (family_assigned) — DUF2530 domain-containing protein Rv0879c lpqM (requalified) — neutral zinc metallopeptidase lpqM Rv2049c (family_assigned) — hypothetical protein Rv2049c lpqW (requalified) — lipoarabinomannan biosynthesis protein LpqW lpqW Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv3850 (family_assigned) — DUF6474 family protein Rv3850 35kd_ag (family_assigned) — hypothetical protein 35kd_ag pirG (requalified) — exported repetitive protein pirG chiZ (requalified) — cell wall hydrolase ChiZ chiZ lmeA (requalified) — mannan chain length control protein LmeA lmeA Rv3707c (requalified) — hypothetical protein Rv3707c menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.