MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0248c · 21 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0248c (family_assigned) — fumarate reductase/succinate dehydrogenase flavopr Rv0248c Rv0247c (family_assigned) — succinate dehydrogenase/fumarate reductase iron-su Rv0247c sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC Rv0249c (family_assigned) — succinate dehydrogenase membrane anchor subunit Rv0249c frdB (family_assigned) — succinate dehydrogenase iron-sulfur subunit frdB sdhB (family_assigned) — succinate dehydrogenase iron-sulfur subunit sdhB sdhD (family_assigned) — succinate dehydrogenase hydrophobic membrane ancho sdhD sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC sucD (family_assigned) — succinyl-CoA ligase subunit alpha sucD frdC (family_assigned) — fumarate reductase subunit C frdC fum (requalified) — class II fumarate hydratase fum frdD (family_assigned) — fumarate reductase subunit FrdD frdD gabD2 (requalified) — succinic semialdehyde dehydrogenase gabD2 frdA (family_assigned) — fumarate reductase (quinol) flavoprotein subunit frdA sdhA (family_assigned) — succinate dehydrogenase flavoprotein subunit sdhA Rv0250c (family_assigned) — hypothetical protein Rv0250c Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT mdh (requalified) — malate dehydrogenase mdh gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT gabD1 (requalified) — succinate-semialdehyde dehydrogenase gabD1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.