MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0243 · 43 genes shown · anchor htdX · open gene page → · ← back to 1 hop

Evidence: Min score 0
fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 fadB (requalified) — fatty oxidation protein FadB fadB htdX (requalified) — 3-hydroxyacyl-thioester dehydratase HtdX htdX fabG4 (requalified) — 3-oxoacyl-ACP reductase fabG4 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 acs (requalified) — acetate--CoA ligase acs glcB (requalified) — malate synthase G glcB leuA (requalified) — 2-isopropylmalate synthase leuA fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 fadA3 (requalified) — acetyl-CoA C-acetyltransferase fadA3 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE24 (family_assigned) — acyl-CoA dehydrogenase family protein fadE24 fadE8 (family_assigned) — acyl-CoA dehydrogenase family protein fadE8 fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY Rv3538 (requalified) — dehydrogenase Rv3538 Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 Rv1716 (family_assigned) — hypothetical protein Rv1716 Rv1717 (family_assigned) — cupin domain-containing protein Rv1717 echA8 (requalified) — enoyl-CoA hydratase echA8 fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 gltA2 (requalified) — citrate synthase gltA2 prpC (requalified) — 2-methylcitrate synthase prpC citA (requalified) — citrate synthase 2 citA Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c icl1 (requalified) — isocitrate lyase icl1 aceAa (requalified) — isocitrate lyase AceAa aceAa aceAb (requalified) — isocitrate lyase AceAb aceAb pta (requalified) — phosphate acetyltransferase pta hsaG (requalified) — acetaldehyde dehydrogenase (acetylating) hsaG leuC (family_assigned) — 3-isopropylmalate dehydratase large subunit leuC leuD (family_assigned) — 3-isopropylmalate dehydratase small subunit leuD ilvD (requalified) — dihydroxy-acid dehydratase ilvD ilvE (requalified) — branched-chain amino acid aminotransferase ilvE accA3 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA3 scoB (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit B scoB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.