MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0241c · 46 genes shown · anchor fabG4 · open gene page → · ← back to 1 hop

Evidence: Min score 0
htdX (requalified) — 3-hydroxyacyl-thioester dehydratase HtdX htdX fabG4 (requalified) — 3-oxoacyl-ACP reductase fabG4 fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 fadB (requalified) — fatty oxidation protein FadB fadB fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE24 (family_assigned) — acyl-CoA dehydrogenase family protein fadE24 fadE8 (family_assigned) — acyl-CoA dehydrogenase family protein fadE8 icd1 (requalified) — NADP-dependent isocitrate dehydrogenase icd1 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 Rv1043c (requalified) — serine protease Rv1043c Rv3363c (family_assigned) — DUF742 domain-containing protein Rv3363c pepD (requalified) — serine protease PepD pepD marP (requalified) — acid resistance serine protease MarP marP fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY Rv3538 (requalified) — dehydrogenase Rv3538 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 acs (requalified) — acetate--CoA ligase acs fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 ltp1 (requalified) — lipid-transfer protein ltp1 accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 echA6 (requalified) — enoyl-CoA hydratase echA6 fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB pflA (requalified) — AmmeMemoRadiSam system radical SAM enzyme pflA fadE16 (family_assigned) — acyl-CoA dehydrogenase family protein fadE16 echA4 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA4 echA5 (requalified) — enoyl-CoA hydratase EchA5 echA5 Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 end (requalified) — deoxyribonuclease IV end acn (requalified) — iron-regulated aconitate hydratase Acn acn Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c icd2 (requalified) — NADP-dependent isocitrate dehydrogenase icd2 Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c mdh (requalified) — malate dehydrogenase mdh fadE36 (family_assigned) — phosphotransferase family protein fadE36 ptbB (requalified) — tyrosine-protein phosphatase PtbB ptbB mpa (requalified) — proteasome ATPase mpa

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.