MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0238 · 46 genes shown · anchor lpqI · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0238 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0238 lpqI (requalified) — lipoprotein LpqI lpqI vapB24 (requalified) — antitoxin vapB24 vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 Rv0158 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0158 Rv1534 (family_assigned) — TetR family transcriptional regulator Rv1534 Rv0236A (dark) — hypothetical protein Rv0236A Rv3208 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3208 pth (requalified) — aminoacyl-tRNA hydrolase pth Rv2506 (family_assigned) — TetR/AcrR family transcriptional regulator Rv2506 Rv0472c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0472c Rv3050c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3050c vapB42 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB42 aftD (family_assigned) — DUF3367 domain-containing protein aftD lpqR (family_assigned) — M15 family metallopeptidase lpqR Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c PPE8 (family_assigned) — PPE family protein PPE8 PPE8 Rv0918 (family_assigned) — DUF1778 domain-containing protein Rv0918 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 ethR (family_assigned) — HTH-type transcriptional regulator EthR ethR kstR2 (family_assigned) — TetR family transcriptional regulator KstR2 kstR2 Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv1533 (family_assigned) — nitronate monooxygenase family protein Rv1533 Rv1532c (family_assigned) — PaaI family thioesterase Rv1532c Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv3239c (requalified) — MFS transporter Rv3239c Rv0235c (family_assigned) — lipase maturation factor family protein Rv0235c gabD1 (requalified) — succinate-semialdehyde dehydrogenase gabD1 lppM (requalified) — lipoprotein LppM lppM narL (requalified) — two-component system response regulator NarL narL sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c Rv1474c (family_assigned) — helix-turn-helix domain-containing protein Rv1474c rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY ychF (requalified) — redox-regulated ATPase YchF ychF mfd (requalified) — transcription-repair coupling factor mfd lpqT (requalified) — lipoprotein LpqT lpqT mesJ (requalified) — tRNA lysidine(34) synthetase TilS mesJ atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH Rv2499c (family_assigned) — MaoC family dehydratase Rv2499c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.