MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0237 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
lpqI (requalified) — lipoprotein LpqI lpqI Rv0236A (dark) — hypothetical protein Rv0236A Rv0238 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0238 aftD (family_assigned) — DUF3367 domain-containing protein aftD lpqR (family_assigned) — M15 family metallopeptidase lpqR vapB24 (requalified) — antitoxin vapB24 vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA Rv0235c (family_assigned) — lipase maturation factor family protein Rv0235c Rv3242c (family_assigned) — ComF family protein Rv3242c lpqL (family_assigned) — M28 family metallopeptidase lpqL lpqK (family_assigned) — serine hydrolase domain-containing protein lpqK Rv2525c (family_assigned) — DUF1906 domain-containing protein Rv2525c gabD1 (requalified) — succinate-semialdehyde dehydrogenase gabD1 lppM (requalified) — lipoprotein LppM lppM Rv0158 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0158 Rv1534 (family_assigned) — TetR family transcriptional regulator Rv1534 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv0224c (requalified) — class I SAM-dependent methyltransferase Rv0224c mmpA (requalified) — hypothetical protein mmpA mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv0227c (family_assigned) — membrane protein Rv0227c Rv0839 (family_assigned) — methyltransferase domain-containing protein Rv0839 Rv0315 (requalified) — family 16 glycosylhydrolase Rv0315 ddlA (requalified) — D-alanine--D-alanine ligase DdlA ddlA mutB (requalified) — methylmalonyl-CoA mutase mutB Rv0175 (family_assigned) — hypothetical protein Rv0175 Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c PPE8 (family_assigned) — PPE family protein PPE8 PPE8 Rv0918 (family_assigned) — DUF1778 domain-containing protein Rv0918 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 sugI (requalified) — sugar-transport integral membrane protein SugI sugI glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS mrsA (requalified) — phosphoglucosamine mutase mrsA devB (requalified) — 6-phosphogluconolactonase devB Rv0669c (requalified) — neutral ceramidase Rv0669c Rv1869c (requalified) — FAD-dependent oxidoreductase Rv1869c xerC (requalified) — tyrosine recombinase XerC xerC Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c tyrA (requalified) — prephenate dehydrogenase TyrA tyrA apt (requalified) — adenine phosphoribosyltransferase apt hemY (requalified) — protoporphyrinogen oxidase hemY lpqM (requalified) — neutral zinc metallopeptidase lpqM

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.