MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0236A · 46 genes shown · anchor lpqI · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0236A (dark) — hypothetical protein Rv0236A lpqI (requalified) — lipoprotein LpqI lpqI aftD (family_assigned) — DUF3367 domain-containing protein aftD Rv0235c (family_assigned) — lipase maturation factor family protein Rv0235c Rv0238 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0238 gabD1 (requalified) — succinate-semialdehyde dehydrogenase gabD1 lppM (requalified) — lipoprotein LppM lppM Rv2172c (requalified) — mycobacterial-type methylenetetrahydrofolate reduc Rv2172c atpB (family_assigned) — F0F1 ATP synthase subunit A atpB esxG (requalified) — type VII secretion system protein EsxG esxG cmaA1 (requalified) — cyclopropane mycolic acid synthase CmaA1 cmaA1 esxR (family_assigned) — WXG100 family type VII secretion target esxR Rv0197 (requalified) — oxidoreductase Rv0197 lpqR (family_assigned) — M15 family metallopeptidase lpqR vapB24 (requalified) — antitoxin vapB24 vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv0224c (requalified) — class I SAM-dependent methyltransferase Rv0224c mmpA (requalified) — hypothetical protein mmpA mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv0227c (family_assigned) — membrane protein Rv0227c Rv1869c (requalified) — FAD-dependent oxidoreductase Rv1869c Rv0158 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0158 Rv1534 (family_assigned) — TetR family transcriptional regulator Rv1534 gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT sdhA (family_assigned) — succinate dehydrogenase flavoprotein subunit sdhA Rv0248c (family_assigned) — fumarate reductase/succinate dehydrogenase flavopr Rv0248c gabD2 (requalified) — succinic semialdehyde dehydrogenase gabD2 Rv0247c (family_assigned) — succinate dehydrogenase/fumarate reductase iron-su Rv0247c sdhB (family_assigned) — succinate dehydrogenase iron-sulfur subunit sdhB Rv2170 (requalified) — N-acetyltransferase Rv2170 Rv2732c (family_assigned) — hypothetical protein Rv2732c Rv3205c (family_assigned) — hypothetical protein Rv3205c Rv0010c (family_assigned) — PH domain-containing protein Rv0010c Rv1100 (family_assigned) — hypothetical protein Rv1100 Rv0358 (requalified) — peptidase M50 Rv0358 metH (requalified) — methionine synthase metH metE (requalified) — 5-methyltetrahydropteroyltriglutamate--homocystein metE Rv3015c (requalified) — methionine synthase Rv3015c idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ metB (requalified) — cystathionine gamma-synthase metB atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpE (family_assigned) — F0F1 ATP synthase subunit C atpE

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.